Salmonella enterica subsp. enterica serovar Typhi Ty2: t0197
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Entry
t0197 CDS
T00121
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
stt
Salmonella enterica subsp. enterica serovar Typhi Ty2
Brite
KEGG Orthology (KO) [BR:
stt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stt03019
]
t0197 (hrpB)
Enzymes [BR:
stt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
t0197 (hrpB)
Messenger RNA biogenesis [BR:
stt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
t0197 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAO67929
UniProt:
Q8Z9B9
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All DBs
Position
222741..225182
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AA seq
813 aa
AA seq
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MEPFVTSLPVAAVLPELLTALKTAPQVLLSAPTGAGKSTWLPLQLLQQGPVAGKILLLEP
RRLAARNVAQRLAEALNEKPGETVGYRMRAQSCVGPRTRLEVVTEGVLTRMIQRDPELRG
VGLVILDEFHERSLQADLALALLLDIQQGLRDDLRLLIMSATLDNDRLCQRLPDAPTIVS
EGRAFPVERRYQPLAAHLRFDEAVAMATAELLRNENGSLLLFLPGVGEIQRVHEHLASRV
GSDVLLCPLYGALSLEAQRKAIVPAPAGMRKVVLATNIAETSLTIEGIRLVVDSAQERVA
RFDARTGLTRLVTQRISQASMTQRAGRAGRLAPGICLHLLAKEQAERAAAQSDPEILHSD
LSGLLMEVLQWGCHDPASLFWLDRPPEVNLQAARRLLLMLGALEGERLSARGRKMAATGN
DPRLAAMLVNADEGDSAATAAMLAAILEDPPRGGGTDLSVLFSRRQPGWQQRSQQLLKRL
QVRNGEPDSALIMPLLARAFSDRIARRRGQEGRYQLANGMGAMLDADDALGRHEWLIAPL
LLQGSASPDARILLAQPLDIASLIQACPDLLRQSDTVEWDEAQGTLKAWRRMRIGQLTVS
VQPLAKPSEEELHQAMLNGIRDKGLSVLNWTPEAEQFRLRLHCAAKWLPEYDWPAVDEAS
LLATLENWLLPHMTGVQSLRSLKSLNVTQALRGLLDYAMLQRLDSELPGHYTVPTGSRIT
IRYHEDNPPALAVRMQEMFGEASTPTLAQGRVPLVLELLSPAQRPLQITRDLSAFWQGAY
REVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
gtggagccgtttgtgacgtcattgcccgttgccgccgtattgcctgaattgttgacagcc
ctaaaaaccgcgccgcaggttttgttgtccgcgcctaccggggcggggaaatccacctgg
ctgccgttgcaactcctgcaacaggggccggttgctggaaaaattctcctgcttgaaccg
cgtcgtctggcggcgcgtaatgtcgcccagcgtctggcggaagcgttgaatgaaaagcct
ggcgaaacggtaggttaccggatgcgcgcgcaaagctgcgtggggccgcgtacccggctg
gaagtggtgaccgaaggcgtattgaccagaatgattcagcgcgatcccgaattacgcggc
gtggggctggtgatactggatgaatttcatgagcgcagtttacaggcggatttagcgttg
gcgctgttgctggatatccagcaagggctccgtgacgatctcaggctgttaatcatgtct
gcgacgctggataacgacaggctttgtcagcgactgcctgatgcgccgacgatcgtctcg
gaggggcgcgcgtttcccgtggagcgacgttatcagccgcttgcggcgcatttgcgtttt
gatgaagccgtcgcgatggcgacagcggaactgctgcgcaatgaaaacggttcgctgctg
ctatttttacccggcgtaggcgaaatacagcgcgttcatgaacatctggcgtcgcgggta
gggagcgatgtcctgctttgtccgctgtatggcgcattgtctctggaagcgcaacgcaaa
gcgattgttcccgcacccgccgggatgcgtaaagtggtattggcgactaacattgccgaa
accagtttgacgattgaagggattcgtctggtcgtcgatagcgctcaggagcgcgtggcg
cgattcgacgcgcgaacgggactgacgcggctggttacgcagcgtatcagtcaggcgtca
atgacgcagcgcgcggggcgcgccggacgactggcgccgggtatctgtttacatctgctg
gcaaaagaacaggcggagcgggcggcggcgcaaagcgatccggaaatcttacacagcgac
ctctccggtttgttgatggaggtgttgcagtggggatgtcacgatccggcctcgcttttc
tggctggacaggccgccggaggtgaatcttcaggccgcccgccgtttattattgatgtta
ggcgcgctggagggcgagcgattaagcgcgcgggggcggaaaatggcggcaacaggtaac
gatccgcgcctggcggcgatgttagtcaacgccgacgagggcgacagcgccgccactgcc
gccatgctcgcggccatccttgaggacccgccgcgaggcggcggtacggatttaagcgtg
ctattttcgcggcgacagccgggctggcagcagcgtagccagcagcttttaaaacggctg
caggtgcgtaatggcgagccggatagcgcgcttattatgccgctgttggccagagcgttt
agcgaccgcatcgcgcggcgtcgcggtcaggaagggcgctatcagttagccaatggtatg
ggcgcgatgttagatgcggatgacgcgttgggacgtcatgaatggctgatcgcgccgctg
ttactgcaaggtagcgcctcgccggacgcccgaatattgttggcgcagccgctggatatt
gcctcgctgattcaggcgtgtcctgatttactgcgccagtccgacacggttgaatgggac
gaggcgcagggaacgttgaaagcatggcgcagaatgcgtattggacagttgacggttagc
gttcagccactggcgaagccgtctgaagaggagcttcatcaggcgatgctgaacggcatc
cgcgataaaggtctgtccgtccttaactggacgccggaagcggagcagttccgtctgcgt
ctgcactgtgcggcgaaatggctgccggaatatgactggcctgccgtggatgaggcgtcg
ctgctggcgactctggaaaattggttgctgccgcacatgacaggcgtacagtcgttacgg
agtctgaaatctctgaatgtgactcaggcgttacggggactgcttgactatgccatgctg
caacgtctggatagtgaactgcctgggcattacactgtgccgacgggaagccgaataacg
attcgttatcatgaagataacccgcccgcgctggcggtcagaatgcaggaaatgttcggc
gaggcaagtacgccgacacttgcgcaggggcgagtgccgctggtgctggaactgctttcg
ccagcgcagcgaccgctacagattacgcgcgatttaagcgctttctggcagggggcgtat
cgcgaagtgcaaaaagagatgaaggggcgttaccccaaacatgtctggccggacgatccg
gcgaatacggctccaacgcggcgcacgaagaagtattcgtga
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