Salmonella enterica subsp. enterica serovar Typhi Ty2: t0748
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Entry
t0748 CDS
T00121
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosidase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
stt
Salmonella enterica subsp. enterica serovar Typhi Ty2
Pathway
stt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
t0748 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stt03400
]
t0748 (alkA)
Enzymes [BR:
stt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
t0748 (alkA)
DNA repair and recombination proteins [BR:
stt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
t0748 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AAO68441
UniProt:
Q83T59
LinkDB
All DBs
Position
833616..834485
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AA seq
289 aa
AA seq
DB search
MFTLSWQPPYDWSWMLGFLAARAVDGVETVGEGFYARSLVVGEHRGLVSVRPHLPTHTVQ
VSVSAGLLPVAPACLAKVSRLFDLDCQPEQVAAVLGPLGEDRPGLRLPGSVDTFEQGVRA
ILGQLVSVAMAARLTAKVARRYGEALPDAPDYVCFPGPETLALADPLALKALGMPLRRAE
ALIHLAQATLAGKLALSAPPDIEQSVKNLQTFPGIGRWTANYFALRGWQAKDIFLPDDYL
IKQRFAGMTAAQIRRYAERWKPWRSYALLHIWYTHGWQPSMDSEIAGIQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctgagctggcagccgccttacgactggtcgtggatgttgggctttcttgcc
gcgcgtgcggtggacggcgtggaaacagtaggcgagggcttttatgcgcgcagcctggtg
gtgggcgagcatcgcggactggtcagcgtgaggccccatctgcccacccacactgtgcag
gttagcgtgagcgccggattacttcccgtcgcgccggcgtgtctggcgaaagtttcgcgt
ctgtttgatcttgactgccagcccgagcaggttgccgccgtgctggggccactgggcgag
gacagaccggggctgcgtttaccgggatcggttgatacgtttgaacagggcgtgcgggcg
atactggggcaactggtgagtgtcgcgatggcggcaaggttgacggcgaaagtggcgcgc
cgctatggcgaggcgttgccggatgcgcccgattatgtctgttttcccggtccggaaacg
ctggcgttggccgatccgctggcgcttaaagctctggggatgccgctgcggcgcgccgaa
gcgctgattcatctggcgcaggcgacgctggcgggaaaactggcgctctccgcgccgccg
gatattgagcagagcgttaaaaatttacaaacatttccgggaattggccgctggacggcg
aactatttcgccctgcgcggttggcaggcaaaagatatctttttgcccgatgattactta
attaagcagcgcttcgccgggatgacggccgcgcagatccgtcgctacgcggagcgctgg
aaaccgtggcgttcctacgcgctactgcatatctggtatacccacggctggcaaccgtca
atggatagcgaaatagctggtattcagtaa
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