Salmonella enterica subsp. enterica serovar Typhi Ty2: t1544
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Entry
t1544 CDS
T00121
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
stt
Salmonella enterica subsp. enterica serovar Typhi Ty2
Brite
KEGG Orthology (KO) [BR:
stt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stt03019
]
t1544 (hrpA)
Enzymes [BR:
stt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
t1544 (hrpA)
Messenger RNA biogenesis [BR:
stt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
t1544 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
APHB_HrpA
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_19
AAA_22
T2SSE
nSTAND3
nSTAND_NTPase5
NACHT
AAA_16
ResIII
PhoH
SLFN-g3_helicase
NTPase_1
DUF6145
Motif
Other DBs
NCBI-ProteinID:
AAO69177
UniProt:
Q8Z776
LinkDB
All DBs
Position
complement(1598822..1602724)
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQSTLTLQVLQQRLDALMLRDKQRFSRRLHGVKKVKNPDAQQAIFQTMAKEIEQAATQ
VALREAARPSITYPQNLPVSQKKQDILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
IKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDPERFSRH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGE
REIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITADEQ
QTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATE
KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE
HKSRRRDILVDDDTLFEFYDQRISHDVISARHFDSWWKKISRETPDLLNFEKSMLIKEGA
EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRR
ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVTVDREDW
HWDQVPEHLKITFRVVNDKNKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIW
SFGELPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGFTALHEK
VRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVYRGFVTG
NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDREQMLKVESVQQAWQQWINKLPPARREDDD
VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMDQITA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaatctacgttgacgcttcaggtgttacagcagcggctggatgcactgatg
ctgcgcgacaaacagcgcttttcgcgccgcctgcatggcgtaaagaaagtaaaaaatcct
gatgcgcaacaggccattttccagacgatggcgaaagaaattgaacaggctgcgacgcag
gtcgctctccgcgaagcggcgcgcccctcaatcacttatccgcaaaatctgcctgttagc
cagaagaaacaggacattctggaagcggtccgcgatcatcaggtggtgatcgtggcaggg
gaaaccggttccggtaaaaccacccagttgccgaaaatttgtatggaactgggacgcgga
attaaaggacttattggacatactcaaccgcgtcgtctggcggcgcgcaccgtcgctaac
cgcattgccgaagagttgcaaacggagcctggcggctgcatcggctataaagttcgtttc
agcgatcatgtcagtagcaacaccatggtcaaactgatgacggacggtatcctgctggcg
gaaatccagcaggacaggctattgatgcagtacgacaccatcattattgatgaagcgcat
gaacgcagcctgaatattgacttcttgctcggctatctgaaagagcttctgccgcgtcgc
cccgatctgaaagtgattattacctctgcgaccatcgacccggaacgcttctcgcgccac
tttaataacgcgccgattatcgaagtctctggccgaacgtatcccgtagaagttcgttat
cgccccatcgtggaagaggctgacgacactgaacgcgatcagctacaggcaattttcgac
gctgttgatgaactggggcgtgaaagtcctggcgatatcctgatttttatgagcggagag
cgggaaatccgcgataccgccgatgccctgaacaagctgaacttacggcataccgaagtg
ttgccgctgtatgcacgcttgtcgaacagcgaacagaaccgcgttttccagtcgcacagc
ggacgccgtatcgtgctggcgactaacgtggcggaaacctcgctgacggtgccgggtatc
aaatatgtgatcgatcctggcactgcgcgcatcagccgctacagctaccgcactaaagtg
cagcgcctgccgattgaaccgatctcacaggcttccgccaatcagcgtaaagggcgttgc
ggacgcgtatcggaagggatctgcattcgtctgtattcggaagatgactttttgtcacgc
ccggaatttaccgacccggaaattctacgtaccaacctggcgtcggttattttgcagatg
accgccctgggactgggtgacatagccgccttcccgtttgtcgaagcgccggataagcgc
aatattcaggatggcgtgcgtttgttggaagagctgggggcgattaccgccgacgaacag
caaacggcatataagctgacgccgctgggccgacaattatcccagttgccggtcgacccg
cgcctggcgcgtatggttctggaagcgcaaaaacatggctgtgtgcgcgaagcgatgatc
attacttccgcactctctattcaggatccgcgcgagcgcccagtggataagcagcaggct
tccgatgagaaacaccggcgtttccatgataaggaatccgattttctggcgtttgttaac
ctgtggaattacctcggcgagcaacaaaaggccctgtcgtcgaatcaattccgccgtctg
tgtcgcaccgactatctgaactatttacgcgtgcgtgagtggcaggatatctatacccaa
ctgcgtcaggtggtaaaagaactggggattccggtaaacagcgaacccgcagaataccgg
gaaattcacgttgcgttgttaacggggctgttgtcgcatatcgggatgaaagatgccgat
aaacaagagtacaccggcgcgcgtaacgcccgattctctattttccccggatccggttta
ttcaaaaaaccgccgaaatggacaatggtcgccgagctggtggaaaccagccgtttgtgg
gggcgcatcgctgcccgcattgagccagaatgggtggaaccggtagcccagcacctgatt
aaacgttcatatagcgaaccgcactgggagcgggcgcaaggcgcggtgatggcgacggaa
aaggttactgtctacggtctgccgattgtcgccgcgcgcaaggtgaattatagccagatt
gacccggcgttgtgtcgcgagttgtttatccgccatgcgctggtggagggggactggcaa
acccgtcacgccttcttccgtgagaatctaaaattgcgtgcggaagtcgaggaacttgag
cacaaatctcgccgccgcgatatcctggtggatgacgataccctgtttgagttttatgac
cagcgtattagccatgacgttatttccgcccgccactttgatagttggtggaaaaaaatc
agccgcgagacgccggatctgctcaactttgaaaaaagtatgctgattaaagaaggcgcg
gaaaaaatcagcaaactggattacccgaatttctggcaccagggcaatctcaagctgcgt
ttgagctatcagtttgaaccgggcgcggatgctgacggcgtgaccgtccatattccgttg
ccgctacttaaccaggttgacgagagcggttttgaatggcagatcccagggctgcgccgt
gaattagtgattgcgctgattaaatcgttgccaaaaccggtacgtcgcaactttgttccg
gcgccaaactatgctgaagcgtttttaggtcgcgtaacgccgctggagctgccgctgctg
gacgctctggagcgtgaactgcgccggatgaccggcgtcacggtcgatcgggaagactgg
cattgggatcaggtgcccgagcatctgaaaatcacgtttcgcgtggtgaatgacaaaaac
aagaaactgcaggaagggcgttcgctcgccgagcttaaaaatgcgctgaaaggcaaagtg
caggagacgctctcggcggtagcggatgacggcatcgagcagagcgggctgcatatctgg
agtttcggcgagctgccggaaagctacgaacagaaacgcggtaattataaagtgaaggcg
tggccggcgttagtggatgagcgtgacagcgtcgctatcaaattgtttgataatccgctg
gaacaacaacaggcgatgtggtgcggtttacgccgtctgctgttgctcaatattccttca
ccgattaagtatctgcatgagaaattgccgaataaagccaagctggggctgtactttaac
ccgtacggcaaagtactggagttgattgatgactgtatcgcctgcggggtagataagctg
atagatgccaacggcgggccggtgtggagcgaagcaggtttcaccgcgctgcacgaaaag
gtacgcgccgagctgaatgatactgtggtggatatcgcgaagcaggttgagcggatcctg
acgaccgtattcaatatcaataagcgtctgaaagggcgggtggatatgagcatggcgttg
gggctttccgatatcaaggcgcagatgagcggtctggtataccgtggttttgtgactggc
aacggctttaaacgtctcggcgatacgctgcgttatctgcaggcaattgaaaagcggctg
gagaaactggctgtcgatccgcaccgcgatcgggagcaaatgctgaaagtcgaaagcgtc
cagcaggcgtggcaacaatggataaataaattgcctccagcgcgtcgcgaagatgatgat
gttaaagagatccgttggatgattgaagaactgcgtgtcagttatttcgcccaacagctc
ggtacgccttatcctatttccgataagcgtattttacaggccatggatcagattacggcc
taa
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integrated database retrieval system
