Salmonella enterica subsp. enterica serovar Typhi Ty2: t1615
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Entry
t1615 CDS
T00121
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
stt
Salmonella enterica subsp. enterica serovar Typhi Ty2
Brite
KEGG Orthology (KO) [BR:
stt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stt03016
]
t1615 (rnb)
Enzymes [BR:
stt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
t1615 (rnb)
Transfer RNA biogenesis [BR:
stt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
t1615 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
AAO69242
UniProt:
Q8Z7C9
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Position
1669819..1671753
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHTEKERESAEPEELIEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVQH
EFKEGDWAVAEMRRHPLKGDRSFYADLTQYITFADDHFVPWWVTLARHNLEKEAPNGVAT
EMLDEGLERQDLTALNFVTIDSASTEDMDDALYAEELADGRLQLTVAIADPTAWIAEGSK
LDNAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALACRMIIAADGTIDDDIAF
FAATIESKAKLVYDNVSDWLENNSTWQPENEGIAQQIRLLHRICLSRSEWRHHHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANLCAARVLRDKLGFGIYNVHTGFD
PANADALAALLKTHGLHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGEAIARPQEDITQQMAERRRLNRM
AERDVGDWLYARFLNDKAGTNTRFAAEIIDVSRGGMRVRLVDNGAIAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgcgctgaaggggtcgtaaaagccacggaaaaaggctttggcttccttgaggttgacgcg
caaaaaagctacttcattcctccgccgcagatgaaaaaagtgatgcatggcgatcgtatc
gtcgcggtcatccacacggaaaaagaacgtgagtctgccgagccggaagaactgatcgaa
ccgttcctgacgcgctttgtgggaaaagttcagggtaaaaatgaccgcctgtccatcgtg
ccagatcatccgttgctgaaagacgcgattccctgccgcgccgcgcgcggcgttcagcat
gagttcaaagaaggtgactgggcggttgccgaaatgcgccgccatccgcttaaaggcgac
cgttcgttttacgccgatttaacgcagtacatcacctttgccgacgatcactttgttccc
tggtgggttacgcttgcccgccataacctggaaaaagaagcgccgaacggcgtagcgacg
gagatgctggacgaagggctggagcgccaggatcttaccgcgctgaatttcgtcactatc
gatagcgccagcactgaagatatggatgacgcgctttatgctgaggaattagcggacggc
agactccagcttacggtggctatcgccgatcctaccgcctggattgccgaaggcagtaag
ctggataacgccgcgaaaattcgcgccttcaccaactacctgccgggcttcaatattcct
atgctgccacgtgagctgtctgacgatctgtgttcgctgcgcgccaacgaagtgcgtccg
gcgctcgcctgtcgcatgatcatcgccgcggacggcaccattgacgatgatattgccttt
tttgcggccaccatcgaatcgaaggccaagctggtgtacgacaatgtctccgactggctg
gaaaataacagcacctggcagccggagaacgaaggcattgcccagcagattcgtctgttg
caccgtatttgtctaagccgcagtgagtggcgtcatcatcatgcgttagtctttaaagac
cgcccggattaccgctttgtgcttggcgaaaaaggcgaagtactggatattgtggcggaa
ccgcgccgtatcgctaaccgtatcgtagaagagtcgatgatcgccgctaacctttgcgcc
gcgcgcgtactgcgcgataagctcggtttcggtatttacaacgtacatacgggcttcgat
cccgcgaatgccgacgcgctggccgcgctgctgaaaacgcatggtctgcatgtcgatgcc
gaagaggtgctgacgctggaaggcttctgtaaactgcgtcgcgaactggatgcgcagccc
tccggtttccttgacagccgcattcgtcgcttccagtcttttgcggaaatcagcaccgag
ccggggccgcatttcggtcttggtcttgaggcttatgccacctggacctctcccatccgt
aagtatggcgatatgattaaccatcgcctgctgaaagcggtcatcaagggggaagctatt
gcgcgtccgcaggaagatatcacccagcaaatggcggaacgccgtcgcctgaaccgcatg
gcggagcgcgatgtcggcgactggttatatgcacgcttccttaacgataaggcggggaca
aatacccgtttcgcggcagaaattattgacgtcagccgcggtggtatgcgtgtgcgactg
gtcgataacggcgctatcgcctttatccctgccccgttcctgcacgccgttcgcgatgaa
ctggtatgcagccaggaaaacggtacggtacagattaaaggtgagacggtttataaagtg
acggatgtcattgatgtcactattgcggaagttcgcatggaaacccgcagcattattgcc
cgaccggcagcgtaa
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