Salmonella enterica subsp. enterica serovar Typhi Ty2: t1719
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Entry
t1719 CDS
T00121
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
stt
Salmonella enterica subsp. enterica serovar Typhi Ty2
Pathway
stt03030
DNA replication
stt03430
Mismatch repair
stt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
t1719 (holB)
03430 Mismatch repair
t1719 (holB)
03440 Homologous recombination
t1719 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stt03032
]
t1719 (holB)
03400 DNA repair and recombination proteins [BR:
stt03400
]
t1719 (holB)
Enzymes [BR:
stt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
t1719 (holB)
DNA replication proteins [BR:
stt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
t1719 (holB)
DNA repair and recombination proteins [BR:
stt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
t1719 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
EPF
Motif
Other DBs
NCBI-ProteinID:
AAO69343
UniProt:
Q8Z7J2
LinkDB
All DBs
Position
complement(1786253..1787257)
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AA seq
334 aa
AA seq
DB search
MKWYPWLRPAYEKLVESYQAGRGHHALLIQALPGMGDEALCYALSRYLLCQQPEGHKSCG
HCRGCQLMQAGTHPDYYTLTPDKGKSSLGVDAVREVSEKLYEHSRLGGAKVVWIADAALL
TDAAANALLKTLEEPPEQTWFFLASPEPARLLATLRSRCRLHHLAPPSESYAMSWLSREV
TASQEALLTALRLNAGSPGAALALLQSERWAQREALCQALMDSLHTGDWYALLTALNHEQ
APARLHWLATLLVDALKRQHGASYLTNVDADAVVAALAGPLSPARIQAILNDVCHCRDQL
LHVTGLNRELVLTDLILRIEHYLQPGTLLPVPHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccatggttacggcccgcctatgaaaaactggtagaaagttaccaggcg
ggacgtgggcaccatgcgctactgattcaggccttacctggcatgggcgacgaggcgctg
tgctatgcgctgagccgttatctgttatgccagcagcctgagggccacaaaagctgtggg
cattgccgtggctgtcagcttatgcaggctggcacgcatccggactattacacgctgacg
ccggataaaggcaaaagcagccttggtgtagatgcggtacgcgaggtcagcgagaaattg
tacgagcactcccgtctgggtggtgcgaaggtggtgtggattgcggatgcggcgctatta
accgacgccgccgccaatgcgttgctcaaaacgctggaagagccgccggagcaaacctgg
tttttccttgccagcccggagcctgctcgtctgttggcgacattacgcagccgttgtcgg
ctgcatcatctggcgccgccgtccgaatcgtatgcgatgtcatggctgtcgcgagaagtg
acggcgtcacaagaagcattgctcacggcgctacgcctgaacgcggggtcgcccggcgcc
gcgctggcgctgttgcagtctgaacgttgggcgcagcgtgaggcgctgtgtcaggcgttg
atggacagtttacatacgggcgactggtatgcgttattaacggcgctcaatcatgagcaa
gccccggcgcgcctgcactggctggcgacgctgctggtagacgcgctgaaacgtcagcac
ggcgcgtcgtacctgacaaacgttgatgcggacgcggttgttgccgcgctggcggggccg
ctatccccggcgcgtattcaggcaatcctgaacgatgtttgccattgtcgtgatcaatta
cttcatgtgaccggattaaatcgcgaactggtattaaccgatctcattctccgcatcgag
cattacctgcaaccaggcaccttgttgcctgttcctcatctttga
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