Salmonella enterica subsp. enterica serovar Typhi Ty2: t2469
Help
Entry
t2469 CDS
T00121
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
stt
Salmonella enterica subsp. enterica serovar Typhi Ty2
Brite
KEGG Orthology (KO) [BR:
stt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stt03400
]
t2469 (sbcC)
DNA repair and recombination proteins [BR:
stt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
t2469 (sbcC)
Archaeal homologous recombinant proteins
t2469 (sbcC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
nSTAND_NTPase5
ABC_tran
nSTAND3
DUF6918
cobW
AAA_21
TsaE
ABC_ATPase
AAA_22
AAA_14
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AAO70059
UniProt:
Q83SZ9
LinkDB
All DBs
Position
2540225..2543335
Genome browser
AA seq
1036 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGEAWRAFWSQNRARNRPDGNLQAPRVELARCS
DGKIFADKVKDKLEMIATLTGLDYGRFTRSMLLSQGQFAAFLNAKAKERAELLEELTGTE
IYGQISAQVFEKHKSARLELEKLQAQASGVALLADEQLQQLEASLQALTDEEKRLLADQQ
GQQQHLHWLTRKNELHTELHARQQALYAAQEAREKAQPQLAALTLAQPARQLRPHWERIQ
EQTRAVERVRQHSDEVNARLQSAYRLRQRIRACAHRQFTQLNATGQRLKTWLAEHDGIRV
WRSELAGWRALLTQQSHDRAQLSQWQQQLLSDMRQRDALPPLTLDLTPQALAEARALHTR
QRPLRHRLAALQGQILPKQKRQAQLQAAIARHHQEQTQYTQRLADKRLSYKTKAQELADV
RTICEQEARIKDLESQRAHLQSGQPCPLCGSTTHPAIAAYQALELSANQTRRDALEKEVK
TLAEEGAALRGQLDALTQQLQRDESEAQSLLQEEQALTEEWQTLCATLGVQLQPQEDLAG
WLTAAEEHEQQLDQLSQRHALQTQIAAHTEQVARFTAQIAQRQASLTADLAQYTLSLPAP
EDEASWLNERADEAKIWQQRQTEFADLQTQIDRLAPLLETLPQTDTADSDDDVPLDNWRQ
THDECVSLQSQLQTLQEQTTQEQQRAAEAIAHFDAALKNSPFDSQATFLAALLDEETVTR
LEKQQQTLESQLQQAKALSAQSAQALADHQQQPPAGLDPTCTAEQLAQRLAQLAQQLREN
TTRQGEIRQQIKQDADNRQRQRALMAEMKQASQQVEDWGYLNALIGSKEGDKFRKFAQGL
TLDNLVWLANHQLTRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLA
LALALSDLVSHKTRIDSLFLDEGFGTLDSETLDAALDALDALNASGKTIGVISHVEAMKE
RIPVQIKVKKNQWAWL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagtttgcgtctgaaaaacctgaactcgctgaaaggagaatggaaggtc
gactttaccgccgaaccgtttgccagtaacgggttattcgccattaccggcccgaccggc
gcgggaaaaaccaccttgcttgacgccatctgcctggcgctgtaccacgaaacgccgcgc
ctgaatacggtatcgcaatcgcaaaacgatttgatgacgcgcgatacggcggaatgtctg
gccgaagtggagtttgaggtaaaaggcgaagcctggcgcgcgttctggagccagaaccga
gcccgaaatcggcctgacggcaatctccaggccccacgcgtggagctggcgcggtgttca
gacggaaagatctttgccgataaggtaaaggataaactggagatgatcgccacgttgacc
gggctggactacgggcgcttcacccgttcaatgttgttatcacaggggcagttcgccgcc
tttcttaacgccaaagcgaaagagcgcgcagagcttctggaggagctcaccggcactgag
atttacgggcagatctccgcacaggtatttgaaaaacataaatcagcccgtctcgaactg
gaaaagttacaagcgcaggccagcggcgtcgccctattggcggacgaacagttacagcaa
ctggaagccagtttgcaggcgcttactgacgaagagaaacgcctgctggccgaccagcag
ggacagcagcagcaccttcactggctgacccgaaaaaacgagctccacactgaattacac
gcccgacagcaggcgctgtacgcggcgcaagaggcgcgagaaaaagcgcagccgcagctc
gcggcgctgacgctggcgcaacctgctcgccagttgcgtccgcattgggagcgcattcag
gaacaaacccgcgccgttgagcgtgttcgccagcacagtgatgaagtgaatgctcgctta
caaagcgcgtatcgcctgcgccagcgtatccgcgcctgcgcgcatcgacaattcacgcaa
ctgaacgccacagggcagcggttgaagacatggctggcggaacacgacggcatccgcgtc
tggcgcagcgaactggcggggtggcgagcattattaacacaacaatcccacgaccgggcg
caactgagccaatggcaacagcagttgctgagcgatatgcgtcagcgtgatgcgctaccg
ccgctcacgctcgacctcacgccacaggcgctggcggaagccagggcattgcatacccgg
cagcgtccgctacgccatcgtctcgccgcgcttcaggggcaaattctcccgaaacaaaag
cgtcaggcgcagctacaggcagctatcgcgcgtcatcatcaggagcagacgcaatacacc
caacgtctggcagataagcgcctgagttataagactaaagcgcaggagcttgcggacgtt
cgcactatttgcgagcaggaggcgcgcatcaaagatctggaaagccagcgggcgcactta
cagtccggccagccgtgtccgctttgcggctcgacgacgcaccccgccatcgccgcctat
caggcgctggaactgagcgcgaatcaaacccgccgcgacgcgctggaaaaagaggtcaaa
acgctggcggaagaaggcgctgcgctgcgaggacagttagatgccttaacgcaacaatta
cagcgggatgaaagcgaggcgcagtcgttgttgcaggaggagcaagcgcttactgaggaa
tggcaaacgctgtgcgctacgctgggcgttcagctccagccgcaagaagacctcgctggc
tggctgaccgccgcggaagagcatgagcaacagttggatcagctcagccagcgtcatgct
ctacaaacgcaaatcgcggcgcatactgaacaggtagcgcgctttaccgcgcagattgca
cagcgtcaggcgtcgctgacggctgatttggcgcagtatacgctttcccttcctgcgcca
gaagacgaggcatcctggctgaatgagcgcgccgacgaagcgaaaatatggcaacagcgt
cagacagagttcgcggatttgcaaacgcagatcgacaggcttgccccgttgctggagacg
ctaccgcaaacggataccgcggattccgacgacgacgtgccgctggataactggcggcag
acgcatgatgagtgcgtgtcattacaaagccagttgcaaaccctgcaggaacagacgacg
caggaacagcagcgcgccgccgaggcgatagcgcactttgatgcggcgttaaaaaatagc
ccgtttgacagccaggcaacgttcctggcggcgttgctggatgaagagaccgtgacccgt
ctggaaaaacaacaacaaacgctggaaagtcagctacaacaagcgaaggcgttaagcgcg
cagtccgcgcaggcgctggctgaccatcagcaacagccacccgccggtctggacccaacg
tgtacggcggagcagctcgcgcagcggctggcgcagttggcgcaacaactgcgcgagaac
acgacacgccagggggaaatccgccagcaaattaaacaggatgcagataatcggcagcgc
caacgggcgctgatggcggaaatgaagcaagcctctcagcaagtggaagactggggctat
ctcaatgcgctgatcggctctaaagaaggtgataagttccgcaaattcgcccagggactg
acgctggataatctggtctggctggcgaatcatcagctcacccgcctgcatggccgctat
ttattgcagcgcaaagccagcgacgcgctggaactggaggttgtcgatacctggcaggcc
gacgccgtgcgcgatacgcgaacgttatcaggcggcgaaagcttcctggtcagcctggcg
ctggcgctggcgttatcagatttggtcagccataaaacgcgcattgattccttgttcctg
gacgaaggcttcggcacgcttgatagcgaaacgctggacgccgcgctggatgcgctcgac
gcgctgaatgccagcgggaagaccatcggtgtgattagccacgtggaagccatgaaagaa
cgtatccccgtgcagataaaagtgaaaaaaaatcaatgggcttggttatag
DBGET
integrated database retrieval system
