Salmonella enterica subsp. enterica serovar Typhi Ty2: t2902
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Entry
t2902 CDS
T00121
Symbol
recB
Name
(GenBank) exonuclease V subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
stt
Salmonella enterica subsp. enterica serovar Typhi Ty2
Pathway
stt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
t2902 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stt03400
]
t2902 (recB)
Enzymes [BR:
stt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
t2902 (recB)
DNA repair and recombination proteins [BR:
stt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
t2902 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AAO70456
UniProt:
Q8Z419
LinkDB
All DBs
Position
complement(2987540..2991085)
Genome browser
AA seq
1181 aa
AA seq
DB search
MNDVAETLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRESTDNPLYARLLEEISDKKQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIA
QVVFDVWKGPKALLKDIDRYLQGEAPVIKAPPSQEETLASRHEQILARINQVKQQWCEAV
SELDALIESSGIDRRKFNRGNQAKWIEKITAWAQEETKNYQLPEALGKFSQRFLAERTKA
GGVTPQHPLFVAIDNLLGEPLSIKDLVLTRALSEIRETVAQEKRRRGELGFDDMLSRLDT
ALRSESGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRHQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVSAHYTLDTNWRSAPGMVNSVNKLFSQMNDAFMFRDIPFSPVKF
APRNQSLQFKVNDAPQPAMTLWLMEGESCGSGDYQSYMAQVCATQIRDWLRAGQTGDALL
TNGDSSRPVRASDISVLVRSRREAALIRDALTLLAIPSVYLSNRDSVFETLEAQEMLWVL
QAVMAPERENTLRSALATSMMGLTALDIETLNNDENAWDAVVEEFDGYRQIWHKRGVMPM
LRALMSARNIAENLLATAGGERRLTDILHISELLQEAGSQLESEHALVRWLAQHILEPDS
NASSQQLRLESDKHLVQIVTIHKSKGLEYPLVWLPFITHFRVQDQAFYHDRHSYEAVLDL
SHAEESIALAEAERLAEDLRLLYVALTRAVWHCSLGVAPLVRRRSDKKGETDVHQSALGR
LLQKGEPMDAAGLRACIEALCDEDIVCRTPGNTDNDRWQIAAASHAELSARTLQRLLYDS
WRVTSYSGLQQRGHSVAQDLIPRLDIDAAGVGEAAEAPAMTPHHFPRGASPGTFLHSLFE
ELDFTQPIDPQWVQEKLELSGFETRWEPVLTRWLDTVLHVPLNETGVSLSVLTEREKQVE
MEFYLPIAQPLTAGELDALIRRYDPLSAGCPALDFMQVRGMLKGFIDLVFRYEGRYYLLD
YKSNWLGEDSAAYTQTAMAAAMQAHRYDLQYQLYTLALHRYLRHRMANYDYERHFGGVIY
LFLRGVDSERPQQGIFTTRPAAALINQLDDMFAGEMSEEAQ
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgtcgccgagactcttgatcctctgcgcttgccccttacaggcgagcgtttg
attgaagcatcagcgggcacaggcaaaacgtttactatcgcggcgctgtatctgcggcta
ctgctcggtttaggcggcagcgccgcatttccccgtccgttgaccgttgaagaactgctg
gtggtaacctttacggaggccgccactgaagagctgcgtgggcgaatccgcagtaatatc
catgagttgcgcatcgcctgtctgcgggaaagcacggataatccgctgtatgcccgcttg
ctggaagaaattagcgacaaaaagcaggccgcgcagtggttattactggcagaacgacaa
atggacgaggccgcggtttttaccatccacggtttttgccagcgtatgctcagcctgaac
gctttcgaatccggtatgttgtttgagcaacagcttattgaagacgaatctttgttgcgt
tatcaggcctgcgccgatttctggcggcgtcattgctatccgctgccgcgcgacatcgcg
caggtggtgtttgacgtgtggaaggggccgaaggcgctcttaaaagatatcgatcgttat
ctgcagggcgaagcgccggtcattaaagcgccgccatcgcaggaggagacgctggcatcg
cgccatgaacagatcctggcgcgcatcaaccaggtgaagcagcagtggtgtgaggcggtt
agcgagctggacgcgctgatcgaatcatccggcatcgatcgcagaaaattcaaccgcggc
aatcaggcgaaatggatcgaaaagatcaccgcgtgggcgcaagaagagaccaaaaattat
caattacccgaggcgttgggaaaattttcacagcgttttttagctgagcgcaccaaagct
gggggcgtgacgccccagcacccattgtttgtcgccattgataacctgttgggcgaaccg
ctatcgattaaagatctggttcttacccgagcgctctcagagatccgtgaaacggtggct
caggaaaaacgacggcgcggcgagctggggtttgacgatatgctcagccgtttagatacc
gcgctgcgtagtgaaagcggcgaggcgctggctgcggcgattcgtacccgttttccggtg
gcgatgatcgatgaatttcaggataccgacccacaacagtaccgtatttttcgccgtatc
tggcgacatcaacccgatacggcgctattgctgattggcgatcctaaacaggcgatttat
gcgtttcgtggcgcggatatctttacctacatgaaggctcgcagcgaagtgagcgcgcac
tatacccttgacactaactggcgctccgcgccggggatggtgaatagcgttaacaagctg
ttcagtcagatgaatgacgcctttatgttccgcgatattcccttcagtccggtaaagttt
gcgcccagaaaccagtcgctgcaatttaaagtgaatgacgcgcctcaaccggcgatgacc
ctgtggctaatggagggggaaagctgcggttcgggcgattatcaaagttatatggcgcag
gtgtgcgccacgcaaattcgcgactggctgcgtgccgggcaaacgggcgacgcgctgctg
acgaacggcgattcgtcgcggcccgttcgcgcctcggatattagcgtgctggtgcgcagc
aggcgggaagccgcgctgatacgggatgcgctgaccttactggcgatcccctccgtctat
ctttctaaccgcgacagcgtattcgaaacgctcgaagcgcaggaaatgctgtgggtgttg
caggcggtgatggcgcccgaacgtgagaatacgctgcgtagcgctctggcgacatcaatg
atgggccttaccgcgctggatatcgaaacgcttaacaatgatgaaaatgcgtgggatgcg
gttgttgaagagtttgatggctaccgacagatttggcataaacgcggcgtgatgcctatg
ctgcgcgcgctaatgtcggcgcgcaatattgctgaaaacctgctggcgacggcgggaggt
gaacgtcggctgacggatattctgcatattagcgaactgttacaggaagccggttcgcag
ctggaaagcgaacatgcgctggtgcgttggctggcgcaacatatccttgaacctgatagc
aatgcttccagccagcaactacgtctggaaagcgataagcatctggtgcaaatcgtcacc
attcataaatcgaaaggtctggaatacccgctggtctggttaccttttatcacccatttc
cgcgtgcaggaccaggctttttatcacgacaggcactcctacgaggcggtgctggacctt
agtcacgccgaagagagcatagcactggcggaagccgaacgcctggcggaagacctgcgc
ctactttatgtcgcgctgacccgtgcagtgtggcattgcagcctcggcgtcgcgccgctg
gtgcggcgtcgtagcgataagaaaggcgagacggatgtgcaccaaagcgcgcttgggcga
ctcctgcaaaaaggcgaaccgatggatgccgcaggccttcgcgcctgtattgaggcgcta
tgcgacgaggatatcgtgtgtcgaacgccaggcaatacggataacgaccgctggcaaatt
gccgctgcatcgcacgcggaactcagcgccagaacgctgcaacgcctgctttatgatagc
tggcgcgtcaccagttattccggtttgcagcagcggggacatagcgtggcgcaagatctt
attcctcgtctcgacattgacgccgcaggcgttggcgaagcggcggaagcgccggcaatg
acgccgcatcactttcctcgcggggcatcgccgggaacatttttgcacagcctgtttgaa
gagcttgattttactcaaccgatagacccccaatgggtacaggaaaaactggagctgagt
ggttttgaaacgcgatgggagcccgtacttacccgctggctggacaccgtgttgcacgtt
ccccttaacgagacgggcgttagtctgagcgtgctgaccgagcgtgaaaaacaggttgaa
atggagttttatctgccgattgcccagccgcttaccgccggagagttagatgcgttgatt
cgtcgatacgacccgctttcagcaggttgccctgcgctggatttcatgcaggttcgcggc
atgttaaagggctttatcgacctggtgttccgttatgaggggcgctattacctgctcgac
tataaatctaactggctgggcgaggatagcgccgcttatacccagacggcgatggctgcg
gcgatgcaggcgcatcgctatgatttgcagtaccagctttatacgctggcattgcatcgt
taccttcgtcatcgaatggcgaattacgactatgaacgccatttcggcggcgtcatctat
ctctttttacgcggggtggatagcgaacgtccgcagcagggtatttttaccactcgtcct
gcggcggcgttaattaaccaactggatgatatgtttgcaggtgaaatgagtgaggaggcg
caatga
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