Salmonella enterica subsp. enterica serovar Typhi Ty2: t3131
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Entry
t3131 CDS
T00121
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
stt
Salmonella enterica subsp. enterica serovar Typhi Ty2
Pathway
stt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
t3131 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stt03021
]
t3131 (rpoD)
Transcription machinery [BR:
stt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
t3131 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DNA_ligase_A_N
TMPIT
YicC-like_N
Motif
Other DBs
NCBI-ProteinID:
AAO70674
UniProt:
P0A2E4
LinkDB
All DBs
Position
3219261..3221243
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AA seq
660 aa
AA seq
DB search
MPHIVREAPDSRSERQRPKYKYALALNVDSYTVDTNQTNKCGYRLMEQNPQSQLKLLVTR
GKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAPDADDLLLAENTTSTD
EDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCS
VAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEEMAPTATHVGSELSQEDLDDD
EDEDEEDGDDDAADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGRSHAAAQEEILKLS
EVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSE
TWFNAAIAMNKPWSEKLHDVAEEVQRCLQKLRQIEEETGLTIEQVKDINRRMSIGEAKAR
RAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATW
WIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDK
IRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTA
REAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatatcgttcgggaagcccccgacagccgcagtgagaggcagcggccaaaatat
aagtatgccctcgctttaaatgtcgacagctataccgtcgacaccaatcaaacgaataag
tgtggataccgtcttatggagcaaaacccgcagtcacagctgaaacttcttgtcacccgt
ggtaaggagcaaggctatctgacctatgctgaggtcaatgaccatctgccggaagatatc
gtcgattcagatcaaattgaagatatcatccaaatgatcaacgacatgggtattcaggta
atggaagaagcgcctgatgccgatgatctgctgctggctgaaaataccaccagcaccgat
gaagatgcggaagaagctgctgcacaagttctgtccagtgttgagtctgaaatcggtcgt
acgactgacccggtacgcatgtatatgcgtgaaatgggcactgttgaactgttgacccgg
gaaggcgaaatcgacatcgctaaacgtatcgaagacgggatcaaccaggttcaatgctcc
gttgccgaatacccggaagccattacctatctgctggaacagtacgatcgcgttgaggct
gaagaggctcgtttgtccgatcttatcaccggctttgtcgatccgaacgcggaagaagag
atggcgccgaccgcaactcacgtcggttctgaactctcccaggaagacctggatgatgac
gaagacgaagatgaagaagacggcgacgatgacgccgccgatgacgacaacagcattgac
cctgaactggcacgcgaaaaattcgctgaactgcgcgcgcaatacgtcgttacgcgcgac
accatcaaagcgaaaggccgcagccatgctgccgcgcaggaagagattctgaagctgtct
gaagtgttcaaacagttccgtctggtaccgaagcaattcgactatctggtcaacagtatg
cgcgtgatgatggatcgcgtgcgtactcaggaacgtctgatcatgaagctctgcgtcgag
cagtgcaaaatgccgaagaagaactttatcacgctgtttaccggtaacgaaaccagcgaa
acctggttcaatgccgctatcgcgatgaacaaaccgtggtcggaaaaactgcacgatgtc
gcggaagaagtgcaacgctgcctgcaaaaactgcggcagatagaagaagagaccggtctg
accatcgaacaggtgaaagacatcaaccgtcgcatgtccatcggggaagcgaaagcccgc
cgtgcgaaaaaagagatggttgaagcgaacttgcgtctggttatttctatcgccaagaaa
tacaccaaccgaggtctgcagttcctcgatctgattcaggaaggcaacatcggtctgatg
aaagcggtagataagttcgaataccgtcgtggttacaagttctccacctacgctacctgg
tggattcgtcaggcgatcacccgctctatcgccgaccaggcgcgcaccatccgtattccg
gtgcatatgattgagaccatcaacaagctcaaccgtatttctcgccagatgctgcaagag
atgggccgcgagccaacgccggaagagctggctgaacggatgctgatgccggaagataaa
attcgtaaggtgctgaaaatcgccaaagagcctatctccatggaaacgccgatcggcgac
gatgaagattcgcatctgggtgatttcatcgaggatactaccctcgagctgccgctggac
tctgccaccaccgagagcctgcgcgccgccactcacgacgttttggctggcctgaccgct
cgtgaagcgaaagtcctgcgtatgcgtttcggtatcgatatgaacaccgaccacacgctg
gaagaagtgggtaaacagttcgacgttacccgcgaacgtatccgtcagatcgaagcgaag
gcgctgcgtaaactgcgccaccctagccgttctgaagtgctgcgcagcttcctcgacgat
taa
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