Salmonella enterica subsp. enterica serovar Typhi Ty2: t3372
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Entry
t3372 CDS
T00121
Symbol
rffA
Name
(GenBank) lipopolysaccharide biosynthesis protein
KO
K02805
dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:
2.6.1.59
]
Organism
stt
Salmonella enterica subsp. enterica serovar Typhi Ty2
Pathway
stt00541
Biosynthesis of various nucleotide sugars
stt01100
Metabolic pathways
stt01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
stt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
t3372 (rffA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stt01007
]
t3372 (rffA)
Enzymes [BR:
stt01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.59 dTDP-4-amino-4,6-dideoxygalactose transaminase
t3372 (rffA)
Amino acid related enzymes [BR:
stt01007
]
Aminotransferase (transaminase)
Others
t3372 (rffA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
OKR_DC_1
Beta_elim_lyase
GCD14
Androglobin_V
Motif
Other DBs
NCBI-ProteinID:
AAO70896
UniProt:
Q8Z393
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Position
complement(3471837..3472967)
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AA seq
376 aa
AA seq
DB search
MIPFNAPPVVGTELEYMQSAMSSGKLCGDGGFTRRCQQWLEQHFGSAKVLLTPSCTASLE
MAALLLDIQPGDEVIMPSFTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITDKT
RAIVPVHYAGVACEMDVIMALADKYNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHET
KNYTAGGEGGATLINDRTLIERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQA
AYLWAQLEAADRINQQRLSLWQTYYDALTPLARAGRIELPSIPENCGHNAHMFYIKLRDI
ADRSALINFLKEAEIMAVFHYIPLHDCPAGDKFGEFIGDDVYTTKESERLLRLPLFYNLA
PVDQRTVITTLLNYFS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgattccttttaatgcgccgccggtggtgggaaccgaactcgaatacatgcagtctgca
atgagcagcggcaaactgtgcggcgacggcggctttacgcgtcgttgccagcagtggctg
gagcaacatttcggcagcgcgaaggtgttgctgacgccttcctgtaccgcgtctttggag
atggcggccctgttgttggatattcagcccggcgatgaagtgatcatgccgagctttacg
tttgtctccactgctaacgcttttgtcctgcgcggcgcgaaaattgtgtttgtcgatatt
cgtccggatacgatgaatattgacgaaacgctgattgaggcggcgattactgataaaacc
cgcgctatcgtgccggtacactacgctggcgtcgcttgtgaaatggacgtcatcatggcg
ctggcggataagtataatctgttcgttgtcgaggacgccgcccagggcgtaatgtccacg
tacaaagggcgcgcgttagggacgatcggtcacatcggctgttttagcttccatgaaacc
aaaaattacaccgctggcggcgaaggcggcgcgacgctgatcaacgatcgtacgctgatt
gaacgcgcggagatcatccgcgaaaaaggcaccaaccgtagccagttcttccgtggtcag
gtggacaaatacacctggcgggatatcggctccagttacttgatgtccgatctgcaggct
gcctacctgtgggcgcaactggaggccgccgatcgtatcaatcaacagcgtctgtcgctg
tggcagacttactacgatgcgttaacgccgctggcgcgcgccgggcgtattgagctgcct
tctattccggaaaactgcgggcataatgcccacatgttttacatcaaactgcgggatatc
gccgatcgcagcgcgctgattaatttcctgaaagaggcggaaatcatggcggtattccat
tacattccgctacatgattgcccggcgggcgataaattcggcgagtttatcggggacgat
gtctacaccacaaaagagagcgaacgtttgttgcgtctgccgctgttttataaccttgcg
cccgtcgatcaacgaacggtgattactaccttgctaaattatttctcctga
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