Salmonella enterica subsp. enterica serovar Typhi Ty2: t3488
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Entry
t3488 CDS
T00121
Symbol
birA
Name
(GenBank) biotin operon repressor
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
stt
Salmonella enterica subsp. enterica serovar Typhi Ty2
Pathway
stt00780
Biotin metabolism
stt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
t3488 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stt03000
]
t3488 (birA)
Enzymes [BR:
stt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
t3488 (birA)
Transcription factors [BR:
stt03000
]
Prokaryotic type
Helix-turn-helix
Other families
t3488 (birA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
HTH_11
HTH_24
MarR_2
HTH_5
FloA
HTH_Crp_2
Linker_histone
Motif
Other DBs
NCBI-ProteinID:
AAO71000
UniProt:
Q8Z317
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All DBs
Position
complement(3578209..3579171)
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AA seq
320 aa
AA seq
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MKDTTVPLTLISLLADGEFHSGEQLGERLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSL
PEPIQLLDADRIHSQLDSGNVAVLPVIDSTNQYLLDRIGELRSGDACVAEYQQAGRGRRG
RKWFSPFGANLYLSMYWRLEQGPAAAIGLSLVIGIVMAEVLRELGADKVRVKWPNDLYLL
DRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEEDVINQGWITLQEAGITLDRNMLAA
KLIYKLRAALELFEQEGLSPYLSRWKKLDNFIDRPVKLIIGDKEIFGISRGIDTQGALLL
EQDGVIKPWMGGEISLRSAE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatactaccgttcccctgacgctgatctcactacttgccgacggagagtttcac
tcaggcgagcagttgggtgaacggctgggaatgagccgtgcggctattaataaacatatc
cagacattacgcgactggggagtagatgtatttaccgttcccgggaaaggatatagctta
ccggaacccatccagttactggatgctgaccgtatacatagccaactggatagcggaaac
gtggcggtattgcccgttatcgattcaaccaatcagtatttacttgatcgaattggcgag
ctgcgttcaggcgatgcctgtgtagcagaataccaacaggcggggcgtggtcgtcgcggg
cgtaaatggttctcaccgtttggtgcgaatctatatctttcaatgtactggcgtctggag
caggggcctgcggcggcaataggcttgagtctggtcattggaattgtgatggcggaagtg
ctgcgtgaactgggcgcagataaagttcgtgtgaagtggcctaacgacctttacctactg
gatcgcaaactggcgggtattctggtcgagttaaccggtaaaacgggcgatgccgcacaa
atagtgattggcgctggtattaacatggcaatgcgtcgtgtagaagaggacgtgataaat
cagggatggatcacactacaagaggccggaattacgctcgaccgcaatatgctggccgca
aagctgatttataagctacgtgctgcgcttgagctttttgagcaagaaggtctttctcct
tatctttcgcgctggaaaaaactggataattttattgatcgtccggtaaaactaattatt
ggcgacaaagaaatatttggtatttcccgcggcattgatactcagggcgcattattgctt
gaacaggatggcgtgattaaaccctggatgggcggagaaatatcgctgcgaagcgccgaa
tag
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