Salmonella enterica subsp. enterica serovar Typhi Ty2: t4120
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Entry
t4120 CDS
T00121
Symbol
yjbC
Name
(GenBank) putative pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
stt
Salmonella enterica subsp. enterica serovar Typhi Ty2
Brite
KEGG Orthology (KO) [BR:
stt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stt03009
]
t4120 (yjbC)
Enzymes [BR:
stt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
t4120 (yjbC)
Ribosome biogenesis [BR:
stt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
t4120 (yjbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
AAO71584
UniProt:
Q8Z1V3
LinkDB
All DBs
Position
4262523..4263392
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AA seq
289 aa
AA seq
DB search
MLTDTSTRLNKYISESGICSRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLIE
PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG
DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT
LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIEGSS
SEAKPKAKAKPKTAGIKRPVVAIEKSNEKARPASSGKRFTSPGRKKKGR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgacacatctacccggcttaataaatatatcagtgaaagcggcatctgttcg
cgtcgcgaggcggaccgttttatcgaacagggcaatgtctttatcaacggcaaacgcgcc
gccattggcgatcaggtggtcgccggggatgttgttaaagtaaatggtcggttgattgag
ccgcgagaagcggatgatttagtgctgattgcgctgaataaaccggttggcattgtcagt
accactgaagacggcgaacgcgacaatattgtcgattttgtgaaccacagcaaacgtatc
ttcccgattggtcgtctggataaagactcgcaggggctgatatttctgactaaccacggc
gatctggtcaataagattctgcgtgccggtaacgatcacgaaaaagagtatctggtgacg
gtggataaaccgattaccgacgagtttattcgcggtatgggcgctggcgtgccgattctg
ggtaccgtcaccaaaaaatgtaaggtgaaaaaagaggcgccgtttgtctttcgcattacc
ctggtgcagggattaaaccgtcagatccgtcgtatgtgtgaatactttggttatgaagtg
acgaaactggagcgtacgcgcattatgaacgtcagcctgagcgggattccgctgggcgag
tggcgcgatctgacggacgatgagctgatcgatctgtttaaattgattgagggttcctct
tccgaagccaaaccaaaggccaaagcgaagccgaagaccgcgggtattaagcgaccggtc
gtggcgatcgaaaaaagcaatgagaaagcgcgcccggcatcaagcggtaagcgctttacc
tcgccgggacgaaagaagaaaggacgttaa
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