Streptomyces sp. TN58: BSL84_08555
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Entry
BSL84_08555 CDS
T09761
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
sttn
Streptomyces sp. TN58
Brite
KEGG Orthology (KO) [BR:
sttn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sttn03019
]
BSL84_08555
Enzymes [BR:
sttn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BSL84_08555
Messenger RNA biogenesis [BR:
sttn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BSL84_08555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_25
AAA_19
AAA_22
AAA_30
nSTAND3
NTPase_1
AAA
ResIII
Motif
Other DBs
NCBI-ProteinID:
APU39817
UniProt:
A0A1L7GCW0
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All DBs
Position
1877076..1879745
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AA seq
889 aa
AA seq
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MIRQAALDALPVREALPELVRALDAHGAAVLCAPPGTGKTTLVPLVLAGLVGGGPLRRVV
VAEPRRIAARAAARRMAWLLGERAGGRVGFTVRGERVAGPGTVVEVVTTGVLLQRLQRDQ
ELAGVDVVVLDECHERHLDADTVAAFLLDVRETLRPELRLVAASATTDSAGWARVLGGAP
VVEAAGVSYPVETVWAPPARPVRPPHGMRVDPAQLAHVASVVRRALAERSGDVLCFLPGV
GEIARVAGQLGGVDAEVLQVHGRAPAAVQDAALTASDHRRVILATSVAESSLTVPGVRVV
VDSGLAREPRVDHARGLGALATVRASRAAGRQRAGRAGREAPGVVYRCWTEAEDGRLPAF
PAPEIRIADLAQFALQAACWGDPDAAGLALLDAPPAGAMAAAREVLVAVGAVDGAGRPSP
RGLRMARLGLHPRLARALLDGGAALGARRAAEVVALLSEEPPREYGDDLAAAWRRARAGG
DGYAARWRAEAARLERALSPAGSTAEPPAEPEAASTPAGTTTQSAAGGGAGTGAAGSSAG
GGYPGRTASPAFGARGTGRSPDDSAAGLVAALAFPERVARARGAGAFLMASGTGADLGDG
SGLRSAPWLAVAVADRPPHSAAARVRLAAVVDEGTALTAAAHLRTRTDEVHWEEGGDVVA
RAVDRLGAVELAVRPLRTPDPALVRAALLDGLRAEGLGLLRWTPDARALRSRLGFLHRTL
GGPWPDVADDAVLVERADDWLEPELSRARRRADLARIDAGQALNRLLPWATGEGVRLDEL
APERIEVPSGSRIRLDYSAEHGQPVLAVKLQELFGLAETPRVAGVPVLVHLLSPAGRPAA
VTADLASFWQGGYRAVRAELRGRYPKHPWPEDPATAEPTRHTNARLRRS
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
ttgatccgccaggccgccctcgacgcccttcccgtacgcgaggccctgcccgaactcgtc
cgcgcactcgacgcgcacggcgccgcggtgctgtgcgcgccgcccgggaccggcaagacg
acgctggtgccgctggtcctcgcgggcctggtgggcggcggcccgctgcgcagggtggtc
gtggccgagccgcggcggatcgccgcccgggcggccgcgcgccggatggcgtggctgctg
ggcgagcgggccggcggccgggtgggcttcacggtccgcggcgagcgggtggccggcccc
ggcacggtggtggaggtggtgaccacgggtgtgctgctccagcggctccagcgcgaccag
gagctggccggcgtggacgtggtcgtcctggacgagtgccacgagcggcacctggacgcc
gacacggtcgccgcgttcctcctcgacgtacgggagaccctgcgcccggagctgcggctg
gtggcggcctcggcgacgacggactcggcgggctgggcgcgggtgctgggcggcgcgccg
gtggtggaggccgcgggggtctcgtatccggtggagaccgtctgggcgcccccggcccgc
ccggtgcggccgccgcacgggatgcgggtggatccggcgcagctcgcgcacgtggcgtcg
gtggtgcggcgggctctggcggagcgttccggtgacgtgttgtgcttcctgcccggcgtc
ggcgagatcgcccgggtggcgggacagctgggcggcgtggacgcggaggttctgcaggtc
cacggccgggccccggcggccgtgcaggacgcggcgctgacggcctcggaccaccggcgg
gtgatcctggcgacgtcggtggcggagtcgagcctgaccgtgcccggggtgcgggtggtg
gtcgactcggggctggcccgtgagccgcgggtggaccatgcccgcgggctgggcgcgctg
gcgaccgtacgggcctcccgtgcggccgggcggcagcgggcgggccgggccgggcgtgag
gccccgggtgtggtgtaccgctgctggacggaggcggaggacgggcggctgccggcgttc
ccggcgccggagatccgtatcgccgacctggcgcagttcgccctgcaggcggcgtgctgg
ggagacccggacgcggccgggctggcgctgctggacgcaccgccggccggggcgatggcg
gcggcgcgggaggtgctggtggccgtcggagcggtggacggggccggccggccgagcccg
cgcggtctgcggatggcccggctcggtctgcacccccggcttgcgcgggccctgctcgac
ggcggcgcggcgctcggcgcccgccgggcggcggaggtggtggcgctgctgagcgaggag
ccgccgcgcgagtacggggacgacctggccgcggcctggcggcgggcccgggccggcggc
gacggctacgcggcgcgctggcgcgcggaggccgcccgcctggagcgggccctgtcccct
gcggggagcactgcggaacccccagccgagcccgaggccgcaagcacccctgcggggacc
accacgcagtccgcagccgggggcggggccgggaccggggctgcggggagctccgccggg
ggcggatacccgggcaggacagcctcgccggcgtttggggcgcggggtacggggcggagc
cccgacgattccgccgccggcctcgtcgccgcgctcgccttccccgagcgggtggcccgg
gccaggggggcgggggccttcctcatggcctcggggaccggggccgacctcggtgacggc
tcggggctgcgcagcgcgccctggctggccgtcgccgtggcggaccggcccccgcactcg
gccgccgcacgggtccggctggccgcggtcgtcgacgagggcacagccctgaccgccgcc
gcgcacctgcgcacgcgcaccgacgaggtgcactgggaggagggcggcgacgtcgtcgcc
cgggccgtcgaccgcctcggggcggtcgagctggccgtacgccccctgcggaccccggac
ccggcgctcgtacgggccgcgctgctcgacgggctgcgcgccgagggcctgggcctgctg
cgctggaccccggacgcgcgggccctgcggtcccgcctcggcttcctgcaccgcacgctg
ggcggtccgtggccggacgtggccgacgacgccgttctcgtggagcgggccgacgactgg
ctggagcccgagctgtcccgggcccggcggcgcgcggacctcgcccggatcgacgccggg
caggccctgaaccggctgctgccgtgggccaccggcgagggggtccggctggacgagctg
gcgcccgagcgcatcgaggtgcccagcggttcccggatccggctggactactccgccgag
cacgggcagccggtgctcgcggtgaagctccaggagctgttcgggctggccgagaccccg
cgggtggcgggggtgccggtgctggtgcatctgctgtcgccggccggccggcccgcggcg
gtcaccgccgacctggcctccttctggcagggcggctaccgtgccgtccgcgcggagctg
cgcggccgctaccccaagcacccctggccggaggatccggcgaccgccgagcccacccgc
cacaccaacgcccggctcaggcggagctga
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