Streptomyces sp. TN58: BSL84_20235
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Entry
BSL84_20235 CDS
T09761
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sttn
Streptomyces sp. TN58
Pathway
sttn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sttn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSL84_20235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sttn03019
]
BSL84_20235
03110 Chaperones and folding catalysts [BR:
sttn03110
]
BSL84_20235
03029 Mitochondrial biogenesis [BR:
sttn03029
]
BSL84_20235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sttn04147
]
BSL84_20235
Enzymes [BR:
sttn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BSL84_20235
Messenger RNA biogenesis [BR:
sttn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BSL84_20235
Chaperones and folding catalysts [BR:
sttn03110
]
Heat shock proteins
HSP60 / Chaperonin
BSL84_20235
Mitochondrial biogenesis [BR:
sttn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BSL84_20235
Exosome [BR:
sttn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BSL84_20235
Exosomal proteins of other body fluids (saliva and urine)
BSL84_20235
Exosomal proteins of breast cancer cells
BSL84_20235
Exosomal proteins of colorectal cancer cells
BSL84_20235
Exosomal proteins of bladder cancer cells
BSL84_20235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
APU41741
LinkDB
All DBs
Position
4427214..4428842
Genome browser
AA seq
542 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
LDDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSEDLLATARPIEDKSDIAAVAALSAQDAQVGELIAEAMDKVGKDGVITVEESNT
FGLELEFTEGMAFDKGYLSPYMVSDQERMEAVLDDPYILINQGKISSIQDLLPLLEKVIQ
AGGSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMATLTGATV
IAEEVGLKLDQAGLDVLGSARRVTISKDDTTIVDGAGSSDEVLGRVNQIKAEIEATDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLDGNLGLSGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVSELDKGQGFNA
ASGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKPAEDEGDAGHGHGHGH
SH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggtgtcaccatcgcccgcgaggtcgag
ctggacgacccgtacgagaacctgggcgcgcagctcgtgaaggaggtggcgaccaagacc
aacgacatcgcgggcgacggcaccaccaccgccaccgtgctggcccaggcgctggtccgc
gagggtctgcgcaacgtcgccgccggcgcttccccggccgccctgaagaagggcatcgac
gccgcggtcaaggccgtgtccgaggacctcctcgcgaccgcccgcccgatcgaggacaag
tccgacatcgccgccgtcgccgcgctctccgcgcaggacgcccaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggcctggagctggagttcaccgagggcatggccttcgacaagggctacctctcgccg
tacatggtctccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
aaccagggcaagatctcctccatccaggacctcctgccgctgctggagaaggtcatccag
gcgggtggctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggcgctctcc
accctcgtcgtcaacaagatccgcggcaccttcaacgcggtggccgtcaaggccccgggc
ttcggtgaccgccgcaaggcgatgctgcaggacatggccaccctcaccggtgccaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctggacgtgctgggttccgcc
cgccgcgtgaccatctccaaggacgacaccaccatcgtcgacggtgcgggcagctccgac
gaggtcctcggccgcgtgaaccagatcaaggccgagatcgaggccacggactccgactgg
gaccgcgagaagctgcaggagcgcctggcgaagctcgccggtggcgtctgcgtcatcaag
gtcggcgccgccaccgaggtggagctcaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctcgtc
cacgccgtgaaggtcctcgacggcaacctcggcctgtcgggcgacgaggccaccggtgtc
gcggtcgtgcgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgcgggcctt
gagggctacgtcatcacctcgaaggtctccgagctcgacaagggccagggcttcaacgcc
gcctccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtgaaggtcacc
cgttccgcgctggagaacgccgcctccatcgcctccctgctgctcacgaccgagaccctg
gtcgtcgagaagccggccgaggacgagggcgacgccggtcacggccacggtcacggccac
agccactga
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