Streptomyces sp. TN58: BSL84_25055
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Entry
BSL84_25055 CDS
T09761
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sttn
Streptomyces sp. TN58
Pathway
sttn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sttn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BSL84_25055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sttn03021
]
BSL84_25055
Transcription machinery [BR:
sttn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSL84_25055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HC2
CDC27
MDM1
Motif
Other DBs
NCBI-ProteinID:
APU42567
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Position
5492435..5494015
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AA seq
526 aa
AA seq
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MFVSASTSRTLPPEIADSESVMALIERGKAEGQIAGDDVRRAFEADQIPATQWKNVLRSL
NQILEEEGVTLMVSAAESPKRTTRKSVAAKSPAKRTATEPVRKTAARATAAQPAAAEAEA
ADPQAPDAPVEEAAAAPAAKKTAAKKTAAKKAAPAKKAAAKKTAAKKTAAKKDADEAGED
ENPEEGPDAVKAEGEEEDEGGENKGFVISDDEDDAPAQQVVVAGATADPVKDYLKQIGKV
PLLNAEQEVELAKRIEAGLFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRL
VVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQ
ARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPIS
LHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLT
DGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgtgtcggccagcacatcccgtacgctcccgccggagatcgccgattccgagtct
gtgatggcgctcatcgagcggggcaaggccgaggggcagatcgccggcgatgacgtgcgt
cgggccttcgaggctgaccagattcctgcgacccagtggaagaatgtcctgcgcagcctc
aaccagatccttgaggaagagggtgtgacgctgatggtcagtgccgcggagtcgcccaag
cgcaccacccgcaagagcgtcgcagcgaagagcccggccaagcggacggccaccgagccc
gtcaggaagacggcggccagggcgacggcggcgcagcccgccgcggccgaagccgaggcc
gcggacccgcaggccccggacgcccccgtcgaggaggccgccgcggcgcccgcggccaag
aagaccgccgcgaagaagacggccgcgaagaaggccgcgcccgccaagaaggcggctgcc
aagaagaccgccgcgaagaagaccgccgccaagaaggacgccgacgaggccggcgaggac
gagaacccggaagagggtcccgacgcggtcaaggccgagggcgaggaagaggacgagggc
ggggagaacaagggcttcgtcatctccgacgacgaggacgacgccccggcccagcaggtc
gtggtggccggtgccacggccgacccggtcaaggactacctcaagcagatcggcaaggtc
ccgctcctcaacgccgagcaggaggtcgagctcgccaagcgcatcgaggccggcctgttc
gccgaggacaagctggcgaactccgacaagctggcgcccaagctcaagcgcgagctggag
atcatcgccgaggacggccgccgcgcgaagaaccacctgctggaggccaacctccgcctc
gtggtctccctcgccaagcgctacaccggccgcggcatgctcttcctggacctgatccag
gagggcaacctgggcctcatccgcgcggtggagaagttcgactacaccaagggctacaag
ttctcgacctatgcgacgtggtggatccgccaggcgatcacccgcgccatggccgaccag
gcccgcaccatccgcatccccgtgcacatggtcgaggtcatcaacaagctcgcccgtgtg
cagcgccagatgctccaggacctgggccgcgagcccaccccggaggagctggccaaagaa
ctcgacatgacccccgagaaggtcatcgaggtccagaagtacggccgcgagccgatctcc
ctgcacaccccgctgggcgaggacggcgacagcgagttcggcgacctcatcgaggactcc
gaggccgtggtcccggccgacgcggtgagcttcacgctcctgcaggagcagctgcactcg
gtactggacacgctgagcgagcgcgaggccggcgtggtgtcgatgcgcttcggcctcacc
gacgggcagcccaagaccctcgacgagatcggcaaggtctacggggtcacccgtgagcgg
atccgccagatcgagtcgaagaccatgtcgaagctgcgccacccgtcccggtcccaggtg
ctgcgcgactacctggactga
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