Streptomyces sp. TN58: BSL84_29320
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Entry
BSL84_29320 CDS
T09761
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sttn
Streptomyces sp. TN58
Pathway
sttn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sttn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSL84_29320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sttn03400
]
BSL84_29320
Enzymes [BR:
sttn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BSL84_29320
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BSL84_29320
DNA repair and recombination proteins [BR:
sttn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSL84_29320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
DUF4566
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
APU43257
UniProt:
A0A1L7GMK6
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All DBs
Position
6520184..6521044
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AA seq
286 aa
AA seq
DB search
MPELPEVEALREYLDEHLTGRVVERVLPLAVSVLKTYDPPPSALEGQPAGAVARHGKFLD
LRIGDLHLVTHLARAGWLRWQETLPAQPPRPGKGPLALRVTLEGGGGFDLTEAGTQKRLA
VYVVHDPGEVPGIARLGPDPLADSFDRDAFAGLLAGERRQIKGVLRDQSVIAGIGNAYSD
EILHAARVSPFKLASSFDEEQVTQLYAAVRETLREAVARAHGVAAGKLKAEKKSGLRVHG
RAGEPCPVCGDTIRSVSFADSSLEYCPTCQTGGKPLADRRLSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgcccgaggtcgaggccctgcgggagtacctcgacgagcacctcaccggg
cgggtggtcgagcgcgtcctcccgctcgcggtgagcgtgctcaagacgtacgacccgccg
ccgagcgccctcgaagggcagcccgccggagccgtcgcccgccacgggaagttcctcgac
ctgcggatcggcgacctccacctcgtcacccacctggcccgcgccggctggctgcgctgg
caggagaccctgccggcccagccgccccggcccggcaagggcccgctggccctccgcgtc
acactggagggcggaggcggcttcgacctcaccgaggccggcacccagaagcggctcgcc
gtgtacgtggtccacgacccgggcgaggtgcccggaatcgcccgcctcggccccgatccg
ctcgccgactccttcgaccgggacgccttcgccggcctcctcgcgggggagcgccgccag
atcaagggcgtcctgcgggaccagagcgtcatcgccggaatcggcaacgcctacagcgac
gagatcctgcacgccgcccgggtgtcgccgttcaagctcgcctcttccttcgacgaggag
caggtcacacagctgtacgccgccgtccgggaaaccctgcgcgaagcggtcgcccgggcg
cacggggtcgccgccgggaagctcaaggccgagaagaagagcgggctgcgcgtacacggc
cgggccggcgagccgtgcccggtgtgcggggacaccatccgctcggtctccttcgccgac
tcctcgctggagtactgccccacctgccagaccggcgggaagccgctcgccgaccggcgg
ctctcacgcctcctcaaatag
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