Streptococcus thermophilus JIM 8232: STH8232_0425
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Entry
STH8232_0425 CDS
T02026
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
stu
Streptococcus thermophilus JIM 8232
Pathway
stu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
STH8232_0425 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stu01007
]
STH8232_0425 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stu03016
]
STH8232_0425 (serS)
Enzymes [BR:
stu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
STH8232_0425 (serS)
Amino acid related enzymes [BR:
stu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
STH8232_0425 (serS)
Transfer RNA biogenesis [BR:
stu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
STH8232_0425 (serS)
Prokaryotic type
STH8232_0425 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Med4
Relaxase_C
OVT1
FBF1
DUF1843
Motif
Other DBs
NCBI-ProteinID:
CCC19169
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All DBs
Position
complement(341352..342629)
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AA seq
425 aa
AA seq
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MLDVKRIRNDFDALSEKLATRGVVAETLNELKELDVKRRELLIKSEELKAQRNIASDDIA
QAKRNKEDASEQIAAMQKVSAEIKEIDAELAAIDEKLNTIIVTLPNIPNDSVPVGADEDE
NVEVRRWGTPRDFDFEVKAHWDLGEDLGILDWERGAKVTGSRFLFYKGLGARLERAIYNF
MLDEHAKEGYTEMITPYMVNHDSMFGTGQYPKFKEDTFELDGTDYVLIPTAEVPLTNYYR
GEILDGKELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPEDSYDELEK
MVVNAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTEDFQA
RRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMGGAE
VILPK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgtaaaacgtattcgtaacgactttgatgccctttccgaaaaattggctaca
cgtggtgtcgttgctgagactttaaatgaactaaaagagcttgatgttaaacgccgtgag
cttcttatcaaatctgaagaactcaaagctcaacgtaatatcgcttcagatgatattgct
caagctaagcgtaacaaagaagatgcttcagaacaaattgcagccatgcaaaaagtttct
gcagagattaaggaaattgatgccgaacttgctgctatcgatgaaaagcttaacactatc
attgtgacacttccaaacataccaaatgattctgttccagtaggtgctgacgaagatgaa
aacgtagaagttcgtcgttggggaacacctcgtgactttgattttgaagttaaagctcac
tgggatttaggggaagatcttggtattcttgactgggaacgtggtgcaaaagttacaggt
tctcgtttccttttctacaaaggtctcggagcaagattggaacgtgcaatctacaacttc
atgttggatgagcacgctaaagaaggttacactgaaatgatcacaccttacatggttaac
cacgactctatgtttggtactggtcaatatccaaaattcaaagaagacactttcgaactt
gatggtactgactacgtccttatcccaacagccgaagttcctttgaccaactactaccga
ggtgagattcttgacggtaaagaattgccaatctacttcacagccttgagcccttcattc
cgttcagaagctggttcagcaggtcgtgacacacgtggtttgattcgtcttcaccaattc
cacaaggttgaaatggtcaaattctcaaaacctgaagactcttatgatgaattggaaaaa
atggtagttaatgctgaaaacatccttcaaaaacttaacttgccataccgtgtcatcact
ttgtgtactggcgacatgggattctcagctgcgaaaacttacgacttggaagtttggatt
ccagcacaaaatacttaccgcgaaatttcttcatgttcaaacacagaagatttccaagct
cgtcgtgcacaaatccgttaccgtgacgaagctgatggcaaagtaaaacttcttcacact
ctcaacggttcagggcttgctgttggacgcacagtagccgctatccttgaaaactaccaa
aatgaagatggttcagtaactatccctgaagttcttcgtccttacatgggtggtgctgaa
gtgattttaccaaaataa
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