Streptococcus thermophilus JIM 8232: STH8232_1423
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Entry
STH8232_1423 CDS
T02026
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
stu
Streptococcus thermophilus JIM 8232
Pathway
stu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
STH8232_1423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stu03400
]
STH8232_1423
Enzymes [BR:
stu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
STH8232_1423
DNA repair and recombination proteins [BR:
stu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
STH8232_1423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RMI2
Motif
Other DBs
NCBI-ProteinID:
CCC20106
LinkDB
All DBs
Position
complement(1179179..1180519)
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AA seq
446 aa
AA seq
DB search
MSDYLSVTSLTKYLKMKFDRDPYLERVYLTGQVSNYRRRPSHQYFSLKDEGAVIQATIWA
GVFKKIGFDLEEGMKINVVGRVQIYEPSGSYSLIIEKAEPDGIGALALQFEQLRKKLTAE
GYFDDRHKQPLPNFVKKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQE
IVENIQKANQREDLDLLIVGRGGGSIEDLWAFNEEIVVQSIFESRLPVISSVGHETDTTL
ADFVADRRAATPTAAAELATPISKADTLAWIRERQNRAYQACLRRIQYNQERLAKLSQSV
VFRQPERLYDGYLQKLDRLTTRLETFMSQDFERKQKSAEFLRQRLHGLNLSTRVKNYQDR
RESLQRLLVTTTKNTINGNRVRLEKAQDALLSLDTSRIVARGYAIVNKNDKPLTTIKDIT
EGEQLTIQMRDGQLEVEVKNVNEKNI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagactatttatcggtcacatccttaaccaaatatttgaaaatgaaatttgaccgt
gacccttatttagagagggtatatttgacaggccaggtttccaattatcgccgacgcccg
agtcatcagtacttttctcttaaggatgaaggggcagtcattcaggcaacgatttgggct
ggggtcttcaaaaaaattggttttgatcttgaagagggaatgaagattaatgttgttggt
cgggtgcagatttatgagcctagtggttcatattcccttattattgagaaggctgagccg
gatggtattggtgcactcgccctccagtttgagcagcttcgtaaaaaacttactgctgaa
ggctactttgatgatcgtcataagcaacctcttcctaattttgtcaagaaaattggggtt
atcactagtcctagtggtgcggttattcgggacattattacaacggttagtcgtcgtttt
ccaggtgtagagattctgcttttccctaccaaggttcaaggtgacggagcggcgcaagag
attgttgaaaatattcaaaaagccaatcagagggaagatctggatcttcttatcgtcggc
cgtggtggaggttcaattgaggacctatgggcctttaatgaggaaattgtagttcagtcc
atttttgagagtcgtctacctgtgatttcaagtgttggtcacgaaacagatacgactctg
gcggattttgtagcggatcgcagggctgctacacctacagcagcagctgaacttgctact
ccgatatcaaaggctgatactttggcttggattcgcgaaagacaaaacagagcctaccaa
gcttgtttgaggcgcatacagtataatcaggaacgtttagccaaattatcacaatcggtt
gtctttaggcaacctgaacgtctttatgatggatatttacaaaagttagatcgcctaaca
acaaggctcgaaaccttcatgagtcaagattttgagcgcaaacaaaaatcagctgaattt
ttgagacagcgattacacggtctaaatctctcgactcgtgttaagaactatcaagatcgt
cgagagtccttacagcgacttttagtgaccacaactaagaatactatcaatggtaaccgc
gttagactagagaaggctcaagatgccctattgtctctagatactagccgtattgttgcc
aggggctatgctattgtcaataaaaatgataagcccctaacaactatcaaagatattact
gaaggcgagcaattaacaatccaaatgagagatggacaactagaagtagaggtgaaaaat
gtcaacgaaaaaaacatttga
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