Streptococcus thermophilus JIM 8232: STH8232_1618
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Entry
STH8232_1618 CDS
T02026
Symbol
sbcC
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
stu
Streptococcus thermophilus JIM 8232
Brite
KEGG Orthology (KO) [BR:
stu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stu03400
]
STH8232_1618 (sbcC)
DNA repair and recombination proteins [BR:
stu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
STH8232_1618 (sbcC)
Archaeal homologous recombinant proteins
STH8232_1618 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
CCC20289
LinkDB
All DBs
Position
complement(1341886..1345065)
Genome browser
AA seq
1059 aa
AA seq
DB search
MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAITVALFATTSGDRN
VEEMRSTFAGPEDDLTKVTFYFQQGNHLYRIDRVLQQERAKQGGGTTMQKATASLVIVDK
IGGQEIEKLGDKIKEVSDQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQILKKI
FGTGIFDHFQKSLEERLRQSNKDMEKRQAQLDGHFASQVWSEEELALLEQTPASEKLTRL
EEFLSQRQENVTKQKSILKDAHEDLAQLQKSLQTAQDMAKIFQEVEQAKERYRMEIEEGA
QGQAEAKAHLEELQFAQGLQETISSLKQYQKQLVQLEQDLDIAQEVLSEKRQAFEDVKAQ
KEELAVQSKDFLQKEEELETWKEDIIYAQSLAQEQEKIKRSMTNYKQLEETYQQARKEIE
MLNKSLSDLEANRLSLESLHEAEKLLQIVGYSVENQLAQDLKEIEDLNQELTKTEKRHQM
LSFDIDQAQEILKELEEELRRTLASRRQLMIVQLQAELEEGQPCMVCGALEHPNIGGAQA
DEVALKNLMDQVEKLQAQKEKQVATLSNRQATLSEVASKRQDLLDKVAKVKVTLEKHYQE
LEEHVKGRFDFDFSVDYETDRGQALLLKVEQYYQELQKRYDREERDYVRYQDELGKAQEK
ATDLAKTYQEAKAVLDQAQERLEDLQEGHPELESVEVYQERISLAHQELNLYNKQVKENS
EAYNQLHADIKGIKGQIESITKSKDKVNQDVKRLSAELEQSLKAEGALANDLEQVELWLI
EVNNQAIPMLQAKLTTYATLKQELQAQIRKGQELLQNQEQPDLDSLAQAVQNCQEIYDRQ
LAQFSVMEKGLKDATATYQAAKTLQDSNQEAFKAHQELSDLVKVVKGENTALTGRLNLEV
YVIRQYFQQILDYANANYIGLLTDNRYSFVLSEEGRRARDHFGLDINVYDQLTGSERSVK
SLSGGETFIAALAIALSLSEVVQNTSKGAVVEALFIDEGFGSLDKEALTKAISVLEQIGE
NRMVGVISHVDDMKEGIAQQLVIIKSHDGSSRIKIVDKG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagtccagttagaattgaccaattttggaccatatcgtaaggaagttattaat
ttcactcagtttgaccatgctcccctctttttgattggaggggacacaggggctggtaag
agtactctctttgatgccataacggtagccttgtttgctacgaccagtggtgatcgtaat
gttgaggagatgcggtcaactttcgctggtccagaggatgatttgaccaaggtgactttc
tatttccaacaaggcaatcacctttatcgcattgaccgagttctccagcaagagagggcc
aagcagggtgggggcactaccatgcaaaaggcgacggcttctctagtcattgtggataag
attggtggtcaggaaattgaaaagcttggggataagatcaaggaagtgagtgaccagatt
gagcagattttggggctcaatgctgagcagttcaaacagattattctccttccacaaaat
gatttcagccgtttcttgaaagaagattctaagaccaagactcaaattttaaagaaaatc
tttggaacgggtatttttgaccattttcaaaagagcttggaagagcgtcttcgtcagagt
aataaggatatggaaaagcgtcaggctcagctagatggccattttgccagtcaggtttgg
tcggaggaagaattagccctcttggagcaaacgccagcctctgaaaaattgacacgtctt
gaagagtttttatctcagcgtcaagaaaatgttacgaagcaaaaaagcatcttgaaggat
gcccatgaggatttggcacaactgcagaagagtttgcaaactgcccaagatatggcaaag
atttttcaagaagtggagcaagccaaggagcgttaccgtatggaaattgaggagggagct
cagggacaggcagaggcaaaagcacatctggaggaattacagttcgctcaaggattacaa
gaaaccattagtagcttgaagcaatatcagaaacagttggtacaattagagcaggacctt
gacattgctcaagaagtattaagtgaaaagcgtcaggcgtttgaggatgttaaggctcaa
aaagaggaactcgcagttcaatctaaggattttcttcaaaaagaagaggagcttgaaact
tggaaagaggatattatctatgcccagagtcttgcccaagaacaggagaaaatcaaacgt
tcaatgactaactacaagcagttggaagaaacctatcagcaggctagaaaagagattgag
atgcttaacaagtccttgtctgacttggaggctaatcgtcttagtttagagagtttacat
gaggccgaaaaactcctccagattgtgggctacagtgtggagaatcaactggctcaggac
ctgaaagaaatagaggacttgaatcaggagttgacaaagaccgaaaaacgtcatcaaatg
ttatctttcgatattgatcaagctcaagaaattctcaaagaattggaagaggagttaaga
aggactttggcttcacgccgtcaactcatgatcgtccaactgcaggcagagttagaggag
gggcagccttgtatggtttgtggtgctctggaacaccctaatattggtggagcacaggct
gatgaagtggccttgaaaaatctcatggatcaggtggagaagcttcaagctcaaaaagaa
aagcaagtcgctactttatcaaatcgtcaggctaccttgagtgaagttgcatctaaacgt
caggatttgcttgacaaagtggctaaagtcaaggtaactcttgaaaagcactatcaagaa
ttagaagagcacgttaagggacggtttgattttgatttttcggtagactatgaaactgac
cgtgggcaagccctactcctgaaggttgagcagtattatcaagagttacaaaaacgttat
gatagggaagagagagattatgtccgatatcaagatgagctaggtaaggctcaagaaaaa
gcgacagatttggctaaaacctatcaagaggccaaggcagtgcttgaccaagctcaagaa
cgcctagaggacttgcaggaaggtcatccagaacttgagtctgttgaggtatatcaagaa
cggatttcccttgctcatcaggagctgaacctctacaataagcaagtcaaggaaaatagc
gaagcctacaaccaacttcatgccgacattaaaggaatcaaggggcagattgagagtata
actaagtctaaagataaggtaaatcaagatgttaagcgattatctgctgaattagagcaa
agtctcaaggctgaaggagccctcgccaatgacttagagcaggtcgaactctggcttatt
gaggtaaataatcaagctattcctatgcttcaggccaaattaacgacctatgcaacgctc
aaacaagaattacaggcgcagattcgtaaggggcaagagcttctccaaaatcaagaacaa
ccagatctcgatagtctagcgcaagcagtacagaattgtcaggaaatctatgataggcag
ctcgctcagttttctgtcatggaaaagggacttaaggatgcgacggctacctaccaagcg
gctaaaacccttcaagacagcaaccaagaggcctttaaggcccaccaagaactcagtgat
ttggttaaggtggttaagggagaaaatactgctctaactggtcgtcttaatcttgaggtc
tacgttatccgtcagtatttccaacaaatcttggactatgccaatgctaactacatcgga
ctattaacggataaccgctattcctttgttctaagtgaggaaggacgcagggcgcgtgat
cacttcggtttggatatcaacgtctatgaccagctgacaggtagtgaacgctccgttaaa
tccttgtctggtggagaaacctttatcgccgcactggctattgccctatccctctcagaa
gtggtgcaaaataccagcaagggtgctgttgttgaagctctcttcatcgacgaaggtttc
ggttcacttgataaggaagccctcaccaaggctatctctgtcctagaacaaatcggtgaa
aatcgcatggtcggtgtcatcagccacgtggacgatatgaaagaaggtattgctcagcaa
ctagttatcatcaagtcgcacgatggcagtagccgtattaaaattgtggataaggggtag
DBGET
integrated database retrieval system
