Streptococcus thermophilus JIM 8232: STH8232_1805
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Entry
STH8232_1805 CDS
T02026
Symbol
rheA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
stu
Streptococcus thermophilus JIM 8232
Pathway
stu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STH8232_1805 (rheA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stu03019
]
STH8232_1805 (rheA)
03009 Ribosome biogenesis [BR:
stu03009
]
STH8232_1805 (rheA)
Enzymes [BR:
stu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STH8232_1805 (rheA)
Messenger RNA biogenesis [BR:
stu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
STH8232_1805 (rheA)
Ribosome biogenesis [BR:
stu03009
]
Prokaryotic type
rRNA helicases
STH8232_1805 (rheA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF6363
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCC20469
LinkDB
All DBs
Position
complement(1505856..1507442)
Genome browser
AA seq
528 aa
AA seq
DB search
MKFTDLNLSEDIQSAVVAAGFEQPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
DKIRTEENTIQALVIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRKALKLNNIETLILDEADEMLNMGFLEDIEAIISRVPEERQTLLF
SATMPDAIKRIGVQFMKDPEHVKIKAKELTNVNVDQYFIRVKEQEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRIIRDFKNGQIDIMVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQSGQSITFVSPNEMGYLGIIENLTKK
RMKGLKPPTAQEAFQSKKKVALKKIERDFADETIRANFDKFKDDAVKLAQEFTPEELALY
ILSLTVQDPETMPEVEIAREKPLPFKPSGGGFGGKGGKVGRGNRGRDNNRRGGYRGDRNR
DDRDGGRRDFKRKSKNNSRDFENRGNKRPHRASSEKKNGFVIRNKGDK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagatttaaacctatcagaagacatccaatcagctgttgtagctgccggt
tttgaacaaccatcacctatccaagagttgacaattccacttgctcttgaaggtaaggat
gtcatcggtcaggcacaaactggtactggtaaaacagctgcctttggtttgcctacccta
gataaaattcgtacagaagaaaatacaattcaagccctggttattgccccaacacgtgag
ttggcagtgcaatctcaagaagagcttttccgttttggccgtgataagggcgttaaggtt
cgctcagtatacggtggttctagcatcgagaaacaaatcaaggccctccgttcaggtgcc
cacattgtagtagggacaccaggtcgtctcctagaccttatcaaacgtaaagcccttaaa
cttaacaatatcgagactttgattttggatgaagctgatgaaatgcttaacatgggcttc
ctagaagacattgaagcaattatcagtcgagtaccagaggaacgtcaaacccttctcttc
tcagcaactatgcctgatgccatcaaacgtattggtgttcagttcatgaaagatcctgag
catgtgaaaatcaaggctaaggaattgaccaatgttaacgttgatcaatactttatccga
gtgaaggaacaagagaagtttgatactatgactcgtcttatggatgttgaccaacctgaa
ttgtcaatcgtctttggacgtaccaaacgtcgtgtggacgagttgacacgtggtttgaaa
cttcgtggtttccgtgcagaaggtatccacggagaccttgaccaaaacaaacgtcttcgt
attatccgtgacttcaagaacggccaaatcgatatcatggttgcaacagatgttgcggcg
cgtggtcttgacatttcaggtgttactcacgtctacaactacgatattccacaagaccca
gaaagctacgttcatcgtattggacgtacaggccgtgcaggccaatcaggtcaatcgatt
acgttcgtttctccaaacgaaatgggttacttgggcatcatcgaaaatttgactaagaaa
cgcatgaaaggccttaagccaccaacagctcaagaagccttccaatctaagaagaaagtt
gcccttaagaaaattgaacgtgactttgcggatgaaactatccgagctaactttgacaag
tttaaggacgatgctgttaaattggctcaagaattcacacctgaagaattggcgctttat
atcttgagcttgaccgttcaagatccagagacaatgccagaagtggaaattgcgcgtgaa
aaaccattgccatttaaaccatcaggtggtggctttggtggtaaaggtggcaaagttggc
cgtggtaaccgtggtcgcgataacaaccgtcgtggtggataccgtggcgaccgtaaccgt
gatgatcgagacggtggtcgtcgagacttcaaacgcaagtctaagaataacagtcgtgac
ttcgaaaatcgtggcaacaaacgcccacaccgtgcttcaagcgaaaagaaaaatggcttt
gttatccgtaacaagggtgataagtaa
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