Streptococcus thermophilus JIM 8232: STH8232_2030
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Entry
STH8232_2030 CDS
T02026
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
stu
Streptococcus thermophilus JIM 8232
Pathway
stu03030
DNA replication
stu03410
Base excision repair
stu03420
Nucleotide excision repair
stu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STH8232_2030 (polA)
03410 Base excision repair
STH8232_2030 (polA)
03420 Nucleotide excision repair
STH8232_2030 (polA)
03440 Homologous recombination
STH8232_2030 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stu03032
]
STH8232_2030 (polA)
03400 DNA repair and recombination proteins [BR:
stu03400
]
STH8232_2030 (polA)
Enzymes [BR:
stu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STH8232_2030 (polA)
DNA replication proteins [BR:
stu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
STH8232_2030 (polA)
DNA repair and recombination proteins [BR:
stu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
STH8232_2030 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STH8232_2030 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CCC20678
LinkDB
All DBs
Position
complement(1687624..1690263)
Genome browser
AA seq
879 aa
AA seq
DB search
MTNQKKLLLIDGSSVAFRAFFALYNQIDRFRNNNGLHTNAIYGFHLMLDNLLERIQPTHV
LVAFDAGKTTFRTEMFADYKAGRAKTPEEFREQLPYIREMLAARGIAYYDLAQYEADDII
GTLAKMAENTSEAFQITVVSGDKDLIQLTDENTVVEISKKGVAEFEAFTPDYLMEKMGIT
PAQFVDLKALMGDKSDNIPGVTKIGEKTGLKLLLEHGSLEGIYDHIDEMKKSKMKENLIN
DKEQAFLSKTLATIDTQSPIEIGLDDTAFKGPNLEKLLAFYDEMGFVHFKNALRGEAVPQ
DFDVAYVEPSQVTADHFSSEDFFYFEILGDNYHTEPIIGFAWGNEKQIYASTDTDLLKSE
AFQAALSKAVNIYDFKRSKVLLSHLGIDLPTANFDARLAKYLLSTVEDNELSTIARLYTD
LPLETDEVVYGKGAKRAIPEKEVLLSHLAKKVKVLQVAKPVMLEKLAEHGQSELLFDMEL
PLANVLAKMEMAGIKVDGQTLNEMAVENQAVIDKLTQDIYEMAGEEFNINSPKQLGVILF
EKMGLPLEYTKKTKTGYSTAVDVLERLAPIAPIVAKILEYRQITKLQSTYVLGLQDYILE
DGKIHTRYMQDLTQTGRLSSVDPNLQNIPVRLEQGRLIRKAFVPSTKDAVLLSSDYSQIE
LRVLAHISGDEHLIAAFKEGADIHTSTAMRVFGIEKPEDVTPNDRRNAKAVNFGIVYGIS
DFGLSNNLGISRKKAKEYIDTYFERYPGIKAYMDNVVREAKDKGYVSTLFHRRRELPDIN
SRNFNVRNFAERTAINSPIQGSAADILKIAMINLDKALVEGGYKTKMLLQVHDEIILEVP
RDELLAMKALVKETMEAAVELAVPLIADENEGCTWYEAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcaaaaaaaattactattaatcgacggttcgtccgttgcctttcgtgctttt
ttcgcactctataatcaaattgaccgttttcgtaacaataacggccttcataccaatgcc
atctacggctttcaccttatgttggacaacctacttgagcgtattcagccgacccatgtc
ttagtagcttttgatgcgggaaaaacaacttttcgtacagagatgtttgcggactataag
gctggtcgtgccaagactccagaggaattccgtgaacagctcccttatatccgtgagatg
ttggctgcacgtggcattgcctattatgacttggctcagtacgaagcagatgacattatc
ggtaccttagctaagatggctgaaaatactagtgaggcctttcaaattactgttgtttct
ggggataaagacttgattcagctgactgatgaaaatacagtcgttgagatttcgaagaaa
ggcgtagctgagtttgaggccttcactcctgactatctcatggagaaaatggggattact
ccagctcaattcgtcgatcttaaggccctcatgggtgacaagtccgacaatattccaggg
gttactaagataggtgaaaagactggtctcaagctcctcttggaacacggttcccttgaa
ggcatctatgaccacattgatgagatgaaaaagtccaaaatgaaggaaaatctcatcaac
gacaaggaacaagccttcctttctaagaccttggcgaccattgatacacagtcacctatt
gaaattggcctagatgatacggcctttaagggacctaaccttgaaaaattgctagccttt
tatgacgagatgggctttgttcatttcaaaaatgctcttcgcggagaggctgtcccacag
gattttgatgtggcctatgtagagcctagccaagtgacagcggatcactttagctctgaa
gatttcttctattttgaaatcctcggtgacaattatcacacagaacctatcatcggtttt
gcttggggaaatgaaaagcagatttatgcgtctacagatactgacctactcaaatcagaa
gcattccaagcagctctttctaaggctgttaatatctacgatttcaagcgcagtaaggtc
cttttgagccatctaggtattgacttgccgacagctaattttgatgcccgtttggccaag
tatttgctctcaactgttgaggacaatgaattgtcaaccattgctcgtctctacacagat
ttaccactggaaacagatgaggtggtctatggtaagggagctaagcgtgccattcctgaa
aaagaggtcttgctcagccacctggcaaaaaaagtcaaggtccttcaggttgccaaaccg
gtcatgctagaaaagttagctgaacatggccaatcagagcttctctttgacatggaatta
ccattggcaaatgtgttagccaagatggaaatggctggtattaaggtcgatggacaaacc
cttaacgagatggcagtggaaaaccaagcagtcatcgacaaattgacccaagacatctac
gaaatggcgggcgaagaattcaatattaactcgcctaaacagttgggtgttatcctcttt
gaaaaaatgggtctacctttggaatacactaagaaaaccaagacaggttattcaacggca
gtggatgtccttgaacgtttggcaccaattgctccaatagtagctaagattttagagtac
cgccaaatcactaagcttcagtctacctatgtcttggggcttcaggattatatccttgag
gatggtaagatccatacccgttacatgcaagatttgacccagacaggtcgactttcatct
gtggatcctaacttgcaaaatatccccgttcgcttggagcagggtcgtctcatccgtaag
gcctttgtcccatcgactaaggacgcagtgctactaagctcggattactcacaaattgag
ttgcgcgtgcttgcccacatttcgggagatgagcatttgattgcagcctttaaggagggg
gcggatatccatacctctacagccatgcgtgtctttggtattgaaaagccagaggatgtc
acacctaacgaccgtcgtaacgctaaggctgttaacttcggtatcgtttatggtatttct
gactttggtctttctaacaaccttggtattagccgtaagaaggccaaggagtatattgac
acctattttgagcgttatcctggtattaaggcttatatggataatgtggttcgtgaagcc
aaggataaaggatatgtatcaaccctcttccaccgccgtcgtgagttaccagatatcaat
tctcgtaactttaatgtccgtaacttcgcagagcgaacagccataaactctcctatccaa
ggaagtgctgctgatatcctcaagattgctatgattaacttagacaaggctctggtagaa
ggtggctataaaaccaagatgctcctccaagtacacgatgaaatcatccttgaggtgcca
agagacgaacttttagctatgaaagctttggttaaagaaaccatggaagctgcagtagaa
ctcgctgtccccctcatcgcagatgaaaatgagggctgtacatggtatgaggcaaagtaa
DBGET
integrated database retrieval system
