Streptococcus thermophilus JIM 8232: STH8232_2236
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Entry
STH8232_2236 CDS
T02026
Symbol
ruvB
Name
(GenBank) holliday junction ATP-dependent DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
stu
Streptococcus thermophilus JIM 8232
Pathway
stu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
STH8232_2236 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stu03400
]
STH8232_2236 (ruvB)
Enzymes [BR:
stu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STH8232_2236 (ruvB)
DNA repair and recombination proteins [BR:
stu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
STH8232_2236 (ruvB)
RecFOR pathway proteins
STH8232_2236 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_14
TIP49
Mg_chelatase
AAA_3
Sigma54_activat
Rad17
nSTAND3
RNA_helicase
DUF815
AAA_18
MCM
AAA_25
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
CCC20872
LinkDB
All DBs
Position
complement(1844435..1845436)
Genome browser
AA seq
333 aa
AA seq
DB search
MARILDNDLLGDEEYVERTLRPQYFKEYIGQDKVKDQLKIFIEAAKLRDEALDHTLLFGP
PGLGKTTMAFVIANEMGVNLKQTSGPAIEKAGDLVAILNDLEPGDILFIDEIHRMPMAVE
EVLYSAMEDYYIDIMIGAGETSRSVHLDLPPFTLVGATTRAGMLSNPLRARFGINGHMEY
YELPDLTEIVERTSEIFEMTITPEAALELARRSRGTPRIANRLLKRVRDYAQIMGDGVID
DKIADQALTMLDVDHEGLDYVDQKILRTMIEMYGGGPVGLGTLSVNIAEERETVEDMYEP
YLIQKGFIMRTRTGRVATAKAYEHMGYDYTRDN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaatattagataatgatttactaggagatgaggagtatgtggagcgtaccctt
cgccctcagtactttaaggaatatattggtcaagataaggttaaggaccaattaaaaatt
tttatagaagcagctaaactccgtgatgaggctctagaccatacccttttgtttggccca
cctggtttgggtaaaacgactatggcatttgtaatcgccaatgagatgggagtgaatttg
aagcaaacatctgggccggcaattgaaaaggctggtgatttagttgccatactcaatgac
ttggagccgggagacatcttatttattgatgagattcatcgtatgcctatggcagtggaa
gaagttctttatagcgctatggaagattactacatcgatatcatgattggagcaggtgaa
acaagtcgtagtgttcatctagacctgcctccctttactttggttggtgcgaccacacga
gcaggtatgctgtcaaatcccttgagagctcgctttggaatcaatggtcatatggaatat
tatgagttacctgatttgacagagattgtagaacgtacttcggaaatctttgaaatgaca
ataacaccagaggctgccttggaattagcacggcgtagtcgtggaacaccacgtattgct
aaccgcctgcttaagcgcgtgcgagactatgctcaaatcatgggtgatggtgtcattgac
gataagattgcagatcaggcattgactatgctggatgtagatcatgaagggttagactac
gttgaccaaaaaatcctccgaactatgattgagatgtatgggggaggcccagttggctta
ggtactttatcagttaatattgctgaagagcgagaaacagtagaagatatgtatgaaccc
tacctaatccaaaaaggtttcattatgcgtacacgaacaggacgtgtcgcaactgctaaa
gcctatgagcatatgggatatgactatactcgagataattaa
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