Streptomyces tubbatahanensis: MMF93_08425
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Entry
MMF93_08425 CDS
T08938
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
stub
Streptomyces tubbatahanensis
Pathway
stub03030
DNA replication
stub03430
Mismatch repair
stub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMF93_08425 (dnaE)
03430 Mismatch repair
MMF93_08425 (dnaE)
03440 Homologous recombination
MMF93_08425 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stub03032
]
MMF93_08425 (dnaE)
03400 DNA repair and recombination proteins [BR:
stub03400
]
MMF93_08425 (dnaE)
Enzymes [BR:
stub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMF93_08425 (dnaE)
DNA replication proteins [BR:
stub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MMF93_08425 (dnaE)
DNA repair and recombination proteins [BR:
stub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MMF93_08425 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UNS96530
LinkDB
All DBs
Position
complement(1951353..1954895)
Genome browser
AA seq
1180 aa
AA seq
DB search
MSEQPFTHLHVHTQYSLLDGAARLKDMFAACNEMGMSHIAMTDHGNLHGAYDFFHSAKDA
GVTPIIGIEAYLAPDHRRNTRPVKWGTPHQKRDDVSGNGAYTHMTMWARNATGLHNLFRA
QSRASLEGFFRKPRMDRELLAEYADGLLATTGCPSGEVSTKIRLGMEDEALKAAGEYQDI
FGKDNFFVELMDHNIEIDKRARDGLERIARKIDAPFIVTNDSHYTYERESAAHDTLLCIQ
TGSNLSDPDRFSFDGAGYYLKSAEEMYGIDSSDAWQSGCRNTQLLVAERIETEGMFEPKN
LMPKFDVPEGYDEISWFKEEVRRGMARRYPGGVPQDRQELADYEMKVIIDMGFPGYFLVV
ADFINWAKDNGIAVGPGRGSAAGSIVSYAMGITDLDPVTHGLIFERFLNPERITMPDVDI
DFDERRRGDVIRYVTEKYGADKVAMIGTYGTIKAKAAIKDASRVLGYPYAMGDRITKAMP
ADVLGKGIPLSGITDPNHPRYSEAGEVRGMYENEPDVKKVIDSAMGIEGLVRQMGMHAAG
VIMSSEPVIDHAPIFSPKNDGTVVTQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMIRK
NKDVDLKLLDLPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRMMKPDHFEDISAVSALY
RPGPMGMNSHINYALRKNGQQEVTPIHPELEEPLKEVLDITHGLIVYQEQVQKAAQVLAG
YSLGQADLLRRAMGKKKKEVLDKEFVNFQKGMRDNGYSDGAIQAVWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMSALLTSVRDDKDKSAVYLNECRKMGIKVLPPNVNES
EANFTSQDDSTIVFGLTAVRNVGQNVVDSIVKCRKAKGKYTSFPDFLDKVEAVVCNKRTV
ESLIKAGAFDEMRHTRKGLTAQFEPMIDNVVQVKRKEAEGQFDLFGDLGGDAADSGPGFG
LDVQFSEEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLNDKADAAIAQLTGGDYSDGSI
VTIGGIISGLQRKMTKQGNAWAIATVEDLAGSIDCMFFPATYQLVSTQLVEDAIVFVKGR
LDKREDVPRLVAMELMIPDLSDASASAPITITIPTVKVTPPLVEKLGYVLTQHRGGSEVR
VRLQGARTTTVLRLDRHRVTPDPALFGDLKELLGPSCLAG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagcagcccttcacgcatctgcacgtgcacacgcagtattcgctcctggacggc
gccgcccggctcaaggacatgttcgccgcgtgcaacgagatgggcatgtcgcacatcgcg
atgaccgatcacggcaatctgcacggggcctacgacttcttccactccgcgaaggacgcc
ggggtcacgccgatcatcggcatcgaggcctacctcgcccccgaccaccgcaggaacacc
cgcccggtcaagtggggcaccccccaccagaagcgggacgacgtctcgggcaacggcgcc
tacacgcacatgacgatgtgggcgcgcaacgccaccgggctgcacaacctcttccgcgcc
cagtcccgcgccagcctggagggcttcttccgcaagccccgtatggaccgcgagctgctg
gccgagtacgccgacgggctgctggcgaccaccggctgcccctcgggagaggtgagcacc
aagatccggctcggcatggaggacgaggccctcaaggccgccggggagtatcaggacatc
ttcggcaaggacaacttcttcgtcgagctgatggaccacaacatcgagatcgacaagcgg
gccagggacggcctggagcgcatcgcgcggaagatcgacgcgcccttcatcgtcaccaac
gactcgcactacacctacgagcgcgagtccgcggcgcacgacaccctgctgtgcatccag
acgggcagcaacctctccgatcccgaccgcttcagcttcgacggcgccggctactacctc
aagtccgccgaggagatgtacggcatcgactcctcggacgcctggcagtccggctgccgc
aacactcagctcctggtcgccgagcgcatcgagaccgagggcatgttcgagccgaagaac
ctgatgccgaagttcgacgtgcccgaggggtacgacgagatctcctggttcaaggaggag
gtgcggcgcggcatggcccgccgctaccctggcggggtcccgcaggaccgccaggagctg
gcggactacgagatgaaggtcatcatcgacatgggcttcccggggtacttcctcgtggtc
gccgacttcatcaactgggccaaggacaacggcatcgcggtcggcccggggcgcggctcg
gcggcgggctcgatcgtctcctacgccatgggcatcaccgacctcgacccggtcacccac
gggctgatcttcgagcggttcctcaaccccgagcgcatcaccatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcggcgacgtcatccggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaccatcaaggccaaggccgccatcaaggac
gcctcccgcgtgctcggctacccgtacgcgatgggcgaccgcatcaccaaggccatgccg
gccgacgtcctcggcaagggcatcccgctgtccggcatcaccgaccccaaccacccccgc
tacagcgaggcgggcgaggtgcgggggatgtacgagaacgagccggacgtcaagaaggtc
atcgactcggccatgggcatcgagggcctggtgcgccagatgggcatgcacgcggcgggc
gtgatcatgtccagcgagccggtcatcgaccacgcgccgatcttctccccgaagaacgac
ggcacagtcgtcacccagtgggactaccccagctgcgagtcgctgggcctgctgaagatg
gacttcctggggctgcgcaacctcaccatcatggacgacgcggtcaagatgatccgcaag
aacaaggacgtcgacctcaagctgctggacctcccgctcgacgatcccaagaccttcgag
ctgctgtgccggggcgacaccctcggcgtcttccagttcgacggcggccccatgcgctcc
ctgctgcgcatgatgaagcccgaccacttcgaggacatctccgccgtctccgcgctctac
cgcccgggcccgatgggcatgaacagccacatcaactacgccctgcgcaagaacggccag
caggaggtcaccccgatccacccggagctcgaggaacccctcaaggaggtcctcgacatc
acccacggcctcatcgtctaccaggagcaggtgcaaaaggccgcccaggtgctcgccggc
tactcgctgggccaggccgacctgctccgccgcgcgatgggcaagaagaagaaggaggtt
ctcgacaaggagttcgtgaacttccagaagggcatgcgggacaacggctactccgacggc
gccatccaggccgtctgggacgtgctggtccccttcgccggctacgccttcaacaaggcg
cactcctccgcctacggcctggtcacctactggacggcctacctgaaggccaactacccg
gcggagtacatgtcggcgctgctcacctcggtgcgcgacgacaaggacaagtcggcggtc
tacctcaacgagtgccgcaagatgggcatcaaggtgctgccgccgaacgtgaacgagtcg
gaggccaacttcacctcgcaggacgactccacgatcgtcttcgggctcaccgccgtgcgc
aacgtcggccagaacgtggtcgactcgatcgtcaagtgccgcaaggccaagggcaagtac
acctcgttccccgacttcctggacaaggtcgaggccgtcgtctgcaacaagcgcaccgtc
gagtccctgatcaaggccggcgccttcgacgagatgcgccacacccgcaagggcctgacc
gcccagttcgagccgatgatcgacaacgtggtgcaggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcgacctcggcggcgacgcggcggactccgggcccggcttcggt
ctcgacgtgcagttctccgaggaggagtgggacaagacctatctgctcgcgcaggagcgc
gagatgctcggactgtacgtctccgaccaccccctcttcggcctcgaacacgtgctgaac
gacaaggcggacgcggccatcgcccagctgaccggcggcgactactcggacggctccatc
gtcaccatcggcggcatcatctcggggcttcagcggaagatgaccaagcagggcaacgcc
tgggccatcgcgacggtcgaggatctggccggctccatcgactgcatgttcttccccgcg
acctatcagctggtctccacacagctggtggaggacgccatcgtgttcgtcaagggccgc
ctggacaagcgcgaggacgtgccccggctcgtggccatggagctgatgattcccgatctc
agcgacgcgtccgcctccgcgcccatcaccatcacgatcccgaccgtgaaggtgacgccg
ccgctggtggagaagctggggtacgtgctcacgcagcaccgcggcggcagcgaggtccgg
gtgcgcctgcagggcgctcgcacgacgacggtgctccggctcgaccgccaccgggtgacg
cccgacccggccctcttcggtgacctcaaggagctcttgggcccgtcctgcctggccggc
tga
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