Streptomyces tubbatahanensis: MMF93_11910
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Entry
MMF93_11910 CDS
T08938
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
stub
Streptomyces tubbatahanensis
Pathway
stub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MMF93_11910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stub03400
]
MMF93_11910
Enzymes [BR:
stub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MMF93_11910
DNA repair and recombination proteins [BR:
stub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MMF93_11910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
PIF1
PhoH
NPHP3_N
TraI_hel_assoc_N
AAA_16
DEAD
TrwB_AAD_bind
DNA_pol_lambd_f
UvrD-helicase
nSTAND3
AAA
SLFN-g3_helicase
HHH_3
ATPase_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UNS97137
LinkDB
All DBs
Position
complement(2765803..2768082)
Genome browser
AA seq
759 aa
AA seq
DB search
MTYQPAVLEGVLERITYANEDNGYTVARVDTGRGAGDLLTVVGALLGAQAGESLRMEGRW
GSHPQYGRQFHVDNYVTVLPATVQGIRRYLGSGLVKGVGPRIADRIVSHFGVRTLQVIEE
DPKKLIDVPGLGPKRTTLIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDASISV
VRGNPYRLAADVWGIGFLTADRIAQSVGIPHESPERVKAGLRHALSQSSDQGHCFLPEER
LISEAVKLLQVDTGLVIDCLGELAADEEEGGVVREAVPDPEDPERDLTAVYLVPFHRAER
ALAAQLHRLLHTPEDLLPAFQDVDWEAALGWLASRTGAALAPEQQEAVRLALTSKVAVLT
GGPGCGKSFTVRSVVELARAKKARVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGD
AAYDRERPLQADLVVVDEASMLDLLLANKLIKAVPPGAHLLLVGDVDQLPSVGAGEVLRD
LLADGGPVPAVRLKRIFRQAQQSGVVTNAHRINAGAPPLTEGMSDFFLFVEEDTEAAGAL
TVDVAARRVPAKFGLDPRDVQVLAPMHRGPAGAGALNGLLQQAVTPARPGLPEKRFGGRV
FRVGDKVTQIRNNYEKGANGVFNGTVGVVTALDADEQRLTVRTDEDEEIGYDFDELDELS
HAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRARRLVVLVGSRRALGQAVR
TVSAGRRCTALDHRLAGRRPPREAGRVPGGDHDGQKGAG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgacgtaccagcctgccgtgctcgaaggggtactggagcgcatcacctacgccaacgag
gacaacgggtacacggtggcccgcgtcgacacgggccgcggcgccggtgacctgctgacg
gtcgtcggcgcgctgctgggcgcccaggcaggcgagtcgctgcgcatggagggccgctgg
ggctcccacccgcagtacggacgccagttccatgtggacaactacgtcacggtgctgccc
gccaccgtccagggcatccgccgctacctgggctcggggctcgtcaagggcgtcgggccg
cgcatcgccgaccggatcgtcagccacttcggcgtgcgcaccctccaggtcatcgaggag
gacccgaagaagctgatcgacgttcccgggctcggtcccaagcgcaccacgctgatcgcc
gccgcctgggaggagcagaaggccatcaaggaggtgatggtcttcctccagggcgtcggc
gtctccacctccatcgccgtgcgcatctacaagaaatacggcgacgcgtcgatctccgtg
gtgcgcggcaacccctaccggctcgcggccgacgtgtggggcatcggcttcctgaccgcc
gaccgcatcgcccagtccgtcggcatcccgcacgagagcccggagcgcgtcaaggccggg
ctgcggcacgcgctctcgcagtcttccgaccaggggcactgcttcctccccgaggagcgg
ctcatctccgaggcggtcaaactcctccaggtcgacaccggcctggtcatcgactgcctg
ggggagctggccgccgacgaggaggagggcggcgtcgtccgcgaggcggtgccggatccc
gaggaccccgagcgggatctgaccgccgtctacctggtccccttccaccgcgccgagcgc
gcactggccgcccagctccaccggctgctgcacacgcccgaggacctgctgcccgccttc
caggacgtggactgggaggcggcgctgggctggctcgcctcccgtacgggcgccgcgctc
gcgccggagcagcaggaggcggtcaggctcgcgctgaccagcaaggtggcggtgctgacc
ggcggtcccggctgcggcaagtccttcacggtgcgctcggtggtggagctggcccgcgcg
aagaaggcccgcgtggtgctggccgctcccacgggccgggcggccaagcggctggccgag
ctgaccggcgccgaggcctccaccgtgcaccggctgctggagctgaagccgggcggcgac
gcggcctacgacagggagcgccccctccaggccgacctggtggtggtggacgaggcctcg
atgctcgacctgctgctggccaacaagctgatcaaggcggtgccgccgggcgcacacctg
ctgctggtcggcgatgtggaccagctgccctcggtcggcgccggcgaggtgctgcgcgac
ctgctggccgacggggggcccgtgccggccgtgcggctcaagcggatcttccgccaggcc
cagcagtccggtgtggtgaccaacgcgcaccgcatcaacgcgggcgccccgccgctgacc
gaggggatgagcgacttcttcctcttcgtggaggaggacaccgaggcggccggtgcgctg
acggtggacgtggcggcgcgccgcgtcccggcgaagttcgggctcgacccgcgcgacgtg
caggtgctggcccccatgcaccgcggcccggccggtgcgggcgctctcaacgggctgctc
cagcaggcggtcaccccggcccgtcccgggctgcccgagaagcggttcggcggccgcgtc
ttccgggtgggcgacaaggtcacccagatcaggaacaactacgagaagggggccaacggc
gtcttcaacggcacggtcggtgtcgtgaccgcgctcgacgccgacgagcagcggctgacg
gtacgcaccgacgaggacgaggagatcggctacgacttcgacgagctggacgagctctcc
cacgcctacgcggtcaccatccaccgttcgcagggcagcgaatacccggccgtggtgatc
ccggtcaccaccggcgcctggatgatgctccagcggaacctgctgtacacggcggtgacg
cgggccagaaggctggtggttctggtcggctcacgcagggcactcggccaggcggtgcgc
accgtctcggccggccggcggtgcacggcgctcgatcaccggttggccggacgcaggccg
ccccgagaggcgggaagggttccggggggtgaccatgacggccagaagggtgcaggatag
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