Streptomyces tubbatahanensis: MMF93_13445
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Entry
MMF93_13445 CDS
T08938
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stub
Streptomyces tubbatahanensis
Brite
KEGG Orthology (KO) [BR:
stub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stub03021
]
MMF93_13445
Transcription machinery [BR:
stub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MMF93_13445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_10
HTH_3
HTH_24
MarR_2
MarR
Sigma70_ECF
DUF7343
IF2_N
Apolipoprotein
GerE
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
UNS97389
LinkDB
All DBs
Position
3149875..3150867
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AA seq
330 aa
AA seq
DB search
MSPRLDNGISDPADMQVATAPAVPEQYSPDRLPDTHPLPTDALTGDQASPEAIAEAVEAD
LFEQFQLPEIPPYDEVGPLDARALSKTLFRRLETLEEGTHEYAYVRNTLVELNLALVKFA
ASRFRSRSEPMEDIVQVGTIGLIKAIDRFELDRGVEFPTFAMPTIVGEIKRFFRDTSWSV
RVPRRLQELRLDLAKAGDELAQKLDRAPTVEELAKRLNISTEDVVEGMAASNAYTASSLD
AQPEEDDTEGALADRIGYEDHGLEGIEYVESLKPLIAELPARDRKILSLRFVANMTQSEI
GEELGISQMHVSRLLSRTLGKLRKGLMIEE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacaacgggatatccgaccccgctgatatgcaggtcgcgacagct
cccgccgttccggagcagtacagcccggaccggctgccggatacccaccccctgcccacc
gacgccctcacaggcgaccaggcgagcccggaagcgatcgccgaggcggtcgaagccgac
ctcttcgagcagttccagctccctgagatcccaccctatgacgaggtcggtccgctggac
gcgcgggccctgtccaagacgctcttccggcgtctggaaaccctcgaagagggcacccac
gaatacgcgtacgtacgcaacacgctggtcgaactcaacctcgcgctggtgaagttcgcc
gcctccaggttccgctcccgcagcgagcccatggaggacatcgtccaggtcggcaccatc
ggcctcatcaaggcgatcgaccgcttcgagctcgaccgcggcgtggagttccccaccttc
gccatgccgaccatcgtcggcgagatcaagcgcttcttccgcgacacgtcctggtcggta
cgcgtaccccgccgcctccaggagctccggctcgacctggccaaggcgggcgacgaactc
gcccagaagctggaccgggcaccgacggtcgaggagctggccaagcggctcaacatctcc
accgaggacgtcgtcgagggcatggcggcgagcaacgcctacaccgccagctcgctggac
gcgcagcccgaggaggacgacaccgagggcgctctggccgaccgcatcggctacgaggac
cacggcctcgaaggcatcgagtacgtcgagtcgctcaagcctttgatcgccgaactcccg
gcgcgcgaccgcaagatcctctcgctgcggttcgtggcgaacatgacccagtcggagatc
ggtgaggagctcggcatctcgcagatgcacgtctcccgtctcctctcccgcaccctgggc
aagctccgcaaggggctgatgatcgaggagtga
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