Streptomyces tubbatahanensis: MMF93_19885
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Entry
MMF93_19885 CDS
T08938
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stub
Streptomyces tubbatahanensis
Pathway
stub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MMF93_19885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stub03021
]
MMF93_19885
03400 DNA repair and recombination proteins [BR:
stub03400
]
MMF93_19885
Enzymes [BR:
stub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MMF93_19885
Transcription machinery [BR:
stub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MMF93_19885
DNA repair and recombination proteins [BR:
stub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MMF93_19885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UNS98461
LinkDB
All DBs
Position
4603280..4604302
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDVTDLILNIKSLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGAEDDTDAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccttccctgaccgaagaggtcgtcgacgagttccggtcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggtaactccctgcgtcgt
acgctcctctcctcgatcccgggtgcggcggtcacgtccatccgtatcgacggtgtcctg
cacgagttctccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctcaacatc
aagtccctcgtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggccccggcctggtcacggccgcggacatcgcgccgcccgccggtgtcgaggtgcacaac
ccggacctggtcctcgccacgctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggccgcggctacgtctccgccgtgcagaacaagcaggtgggccaggagatcggc
cgcatcccggtcgactccatctactcgcccgtcctcaaggtcacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgcccgcgtgacgccatggcgtctgccggcaagaccctggtcgagctgttcggt
ctggcccgcgagctcaacgtcgacgccgagggcatcgacatgggcccgtccccgaccgac
gccgcgctcgccgccgacctggcgctgccgatcgaggagctggagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactcggtgggcgagctggtggcccgctccgag
gcggacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggtatgggcctggcgctgaaggactcgcctcccgggttcgacccgacggctgcg
gctgacgccttcggcgccgaggacgacacggacgccgggttcgtggagaccgagcagtac
tga
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