Streptomyces tubbatahanensis: MMF93_22245
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Entry
MMF93_22245 CDS
T08938
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stub
Streptomyces tubbatahanensis
Brite
KEGG Orthology (KO) [BR:
stub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stub03021
]
MMF93_22245
Transcription machinery [BR:
stub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MMF93_22245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
PF0610-like_N
HTH_23
MarR_2
DUF7343
HTH_24
NirdL-like_HTH
Sigma70_ECF
MarR
HTH_3
IF2_N
HTH_Crp_2
GerE
HTH_ParB
HTH_AraC
DUF3106
HTH_29
Motif
Other DBs
NCBI-ProteinID:
UNT01205
UniProt:
A0ABY3Y2Z5
LinkDB
All DBs
Position
complement(5152008..5152901)
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AA seq
297 aa
AA seq
DB search
MPEQQPRPHPADPSMQRPRQAKRADAMNQQQHERRGRATHGDSRGLDPQDRDGARALFIE
LRKLPDGPERAELRNQLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPE
RGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLSLTSATAELSQQHGRAPTVHE
LAQRLKISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGAEDDALEGVEYRESLK
PLLEELPPREKKILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQLRDRLLVEE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
attcccgaacagcagccccgtccgcacccggccgaccccagcatgcagcgacccaggcag
gcgaagcgggcggacgctatgaaccagcagcagcacgagcggcgtgggcgggcaacccac
ggcgactcccgcgggctcgacccgcaggatcgcgacggcgcgcgcgctctgttcatcgaa
ctgcgcaagctgccggacgggcccgagcgcgccgagctgcgcaatcagctggtgcgcatg
cacctgcccctggtcgagcacctggcccgccggttccgcaaccgcggcgagccgctggac
gacctgacgcaggtcgcgacgatcggcctgatcaaatcggtcgaccgtttcgacccggag
cgcggcgtcgagttctcgacgtacgcgacacccacggtggtcggcgagatcaaacgccac
ttccgtgacaagggctgggccgtgcgcgtgccccgccgcctccaggagctgcggctgtcg
ctcacgtccgcgaccgccgagctctcccagcagcacgggcgcgccccgacggtccacgag
ttggcccagcggttgaagatctccgaggaggaggtgctggaagggctggaatcggccaac
gcctacagcaccctctcgctcgacgtgcccgacaccgacgacgagtcgccggccgtcgcc
gacaccctcggcgcggaggacgacgcgctggagggcgtcgagtaccgcgaatcgctcaaa
cccctgctggaggagctgccgccgcgggagaagaagatcctgctgctgcggttcttcgga
aacatgacccagtcgcagatcgcacaggaggtcggcatctcgcagatgcacgtctccaga
ctcctcgcgcggactctggcccagctccgtgaccgcctgctggtggaggagtga
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