Streptomyces tubbatahanensis: MMF93_24345
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Entry
MMF93_24345 CDS
T08938
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
stub
Streptomyces tubbatahanensis
Pathway
stub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMF93_24345 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stub03400
]
MMF93_24345 (mutM)
Enzymes [BR:
stub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MMF93_24345 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MMF93_24345 (mutM)
DNA repair and recombination proteins [BR:
stub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MMF93_24345 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
DZR
DUF7573
Motif
Other DBs
NCBI-ProteinID:
UNS99236
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All DBs
Position
5619227..5620096
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AA seq
289 aa
AA seq
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MPELPEVEVVRRGLERWVSGRTVTAAEVLHPRAIRRHVAGPLDFAGRLAGRRIGAAMRRG
KYLWLPVDDGAHAVLAHLGMSGQLLVQPAAAPDERHLRVRFTFEDADGGELRFVDQRTFG
GLSLHPASEDGLPDVIAHIARDPLDPEFDQDAFHAALRRRRTTIKRALLDQSLISGVGNI
YADEALWRARLHYDRPTATLTRTQTTELVAHVHDVMTAALAAGGTSFDSLYVNVNGQSGY
FERSLDAYGRQDEPCRRCGTPMRRSAWMNRSSYFCPRCQRAPRPRPARA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgccggaagtcgaggtcgtccgccgcggcctggagcgctgggtcagcggc
cgtacggtcacggccgccgaggtcctccacccgcgcgccatccggcgccacgtcgccgga
ccgctggacttcgccggccggctcgccggccgccgcatcggtgcggccatgcggcgcggg
aagtacctgtggctgcccgtcgacgacggggcgcacgccgtcctcgcgcacctcgggatg
agcggccagctcctcgtccagcccgccgccgcccccgacgagcggcacctgcgggtcagg
ttcacgttcgaggacgcggacgggggcgagctgcgcttcgtcgaccagcgcaccttcggc
gggctctcgctgcacccggcgtccgaggacggcctcccggacgtgatagcgcacatcgcc
cgcgatccgctcgatccggagttcgaccaagacgccttccacgccgccctgcgccgccgc
cgtacgacgatcaagcgagcgctgctcgaccagtccctgatcagcggcgtcggcaacatc
tacgccgacgaggcgctgtggcgcgcacgactgcactacgaccggcccaccgccaccctg
acgcggacgcagaccaccgaactggtggcgcacgtccacgacgtcatgacggccgcgctg
gccgcgggcggcaccagcttcgacagcctctacgtgaacgtcaacggccagtccggctac
ttcgagcgctccctggacgcctacggacgccaggacgagccgtgccgccgctgcggcacc
ccgatgcgccgcagcgcgtggatgaaccgctccagctacttctgcccgcgctgccagcgg
gccccgcgcccgcgcccggcgcgcgcgtag
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