Streptomyces tubbatahanensis: MMF93_24465
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Entry
MMF93_24465 CDS
T08938
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
stub
Streptomyces tubbatahanensis
Pathway
stub02024
Quorum sensing
stub03060
Protein export
stub03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
stub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
MMF93_24465 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MMF93_24465 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MMF93_24465 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
stub02044
]
MMF93_24465 (ffh)
Enzymes [BR:
stub01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
MMF93_24465 (ffh)
Secretion system [BR:
stub02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
MMF93_24465 (ffh)
Eukaryotic Sec-SRP protein
MMF93_24465 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
cobW
CbiA
Zeta_toxin
nSTAND3
APS_kinase
AAA_30
MMR_HSR1
ArsA_ATPase
AAA_18
AAA_16
AAA_33
6PF2K
Thymidylate_kin
NPHP3_N
TsaE
MobB
AAA_24
MeaB
Motif
Other DBs
NCBI-ProteinID:
UNS99259
LinkDB
All DBs
Position
5644145..5645707
Genome browser
AA seq
520 aa
AA seq
DB search
MFDTLSDRLSATFKNLRGKGRLSEADIDATAREIRIALLEADVALPVVRAFIKQVKERAA
GAEVSQALNPAQQVIKIVNEELVGILGGETRRLRFAKNPPTVIMLAGLQGAGKTTLAGKL
GRWLQQQGHTPVLVAADLQRPNAVNQLSVVAERAGVAVFAPEPGNGVGDPVKVAQDSITY
ARDKQHDVVIVDTAGRLGIDQELMRQAADIRDAVSPDEVLFVVDAMIGQDAVTTAEAFQE
GVGFDGVVLSKLDGDARGGAALSVAQVTGKQIMFASNGEKLDDFDAFHPDRMASRILGMG
DMLTLIEKAEQTFSQQEAEKMAAKLAKGPKEFTFDDFLAQMEQVRKMGSLSKLLGMMPGM
GQMKEQINNLDEREVDRTAAIIKSMTPAERAEPTLINGSRRARIARGSGVDVSAVKNLVE
RFFDARKMMSKMAQGGGMPGMPGMPGMPGAGGGKKKGKQQKKAKGKRQSGNPMKRKQEEQ
AAAARRAEGEQGGAFGIPGAGQDPGDFELPQEFKDMLPPK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgataccctttccgaccgcctgagtgcgacgttcaagaacctccggggcaaaggg
cgcctcagcgaggcggacatcgacgccaccgcgcgtgagatccgcatcgccctgctcgag
gcggacgtcgcgctgccggttgtccgcgccttcatcaagcaggtcaaggagcgcgccgcg
ggggccgaggtctcccaggcgctgaaccctgcccagcaggtcatcaagatcgtcaacgag
gagctggtcggcatcctcggcggcgagacgaggcgcctgcggttcgccaagaacccgccg
accgtcatcatgctcgccggcctccagggcgcgggtaagaccacgctggcgggcaagctg
ggccgctggctccagcagcagggccacacgccggtcctggtcgcggccgacctccagcgc
cccaacgcggtcaaccagctctcggtcgtcgccgagcgcgccggggtggccgtcttcgcg
ccggagccgggcaacggggtcggcgatccggtcaaggtcgcccaggactcgatcacctac
gcgcgtgacaagcagcacgacgtggtcatcgtcgacaccgcggggcgtctgggcatcgac
caggagctgatgcggcaggccgccgacatccgcgacgccgtcagccccgacgaggtcctc
ttcgtcgtcgacgccatgatcggccaggacgcggtcaccacggcggaggccttccaggag
ggcgtcggcttcgacggggtcgtgctctccaagctggacggcgacgcgcgcggtggtgcg
gcgctctccgtggcccaggtcaccggcaagcagatcatgttcgcctccaacggcgagaag
ctggacgacttcgacgccttccacccggaccggatggcgtcccgcatcctcggcatgggc
gacatgctcacgctgatcgagaaggcggagcagaccttcagccagcaagaggccgagaag
atggccgccaagctggcgaaggggcccaaggagttcacgttcgacgacttcctggcccag
atggagcaggtccgcaagatgggctcgctctccaagctgctcggcatgatgccgggcatg
ggccagatgaaggagcagatcaacaacctggacgagcgcgaggtcgaccgcacggccgcc
atcatcaagtcgatgacgccggcggagcgcgccgagcccacgctcatcaacggctcccgc
cgggcccgtatcgcccggggctccggggtcgacgtcagcgccgtcaagaacctggtcgag
cgcttcttcgacgcccgcaagatgatgtccaagatggcgcagggcggcggcatgccgggg
atgccagggatgccggggatgcccggggccgggggcggcaagaagaagggcaagcagcag
aagaaggccaagggcaagcgccagtcgggcaacccgatgaagcgcaagcaggaggagcag
gccgcggccgcccgccgggccgagggcgagcagggcggtgccttcggcatccccggcgcg
ggccaggacccgggcgacttcgaacttcctcaggagttcaaggacatgctgcccccgaag
tga
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