Streptomyces tubbatahanensis: MMF93_24820
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Entry
MMF93_24820 CDS
T08938
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stub
Streptomyces tubbatahanensis
Brite
KEGG Orthology (KO) [BR:
stub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stub03016
]
MMF93_24820 (truB)
Enzymes [BR:
stub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MMF93_24820 (truB)
Transfer RNA biogenesis [BR:
stub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MMF93_24820 (truB)
Prokaryotic type
MMF93_24820 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
DUF664
Motif
Other DBs
NCBI-ProteinID:
UNS99320
LinkDB
All DBs
Position
5726471..5727397
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AA seq
308 aa
AA seq
DB search
MARKRDNGPGGLIVVDKPAGFTSHDVVAKLRGMARTRRVGHAGTLDPMATGVLVLGTERA
TRLLGHLALTEKEYVATVRLGQETVTEDAEGEITGAQGAKGLERARVDAAVAALTGRIEQ
VPSAVSAVKVDGKRAYARVREGEEVELAARPVTVSSFLVHDVREEAAEDGTPVTDLLVSV
VCSSGTYVRALARDLGAALGTGGHLTALRRTRVGPYGLDGAHTLAQLQERVDAEQPLPVL
PLGQAAAAAFARWDVDEDQARRIGNGVQLRMPTAQFGPGPVAVFAPQERFVALVEQRDGK
ARSLAVFV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgcaagagagacaacggccccggcgggctgatcgtcgtcgacaagcccgccggg
ttcacctcgcacgacgtcgtggccaagctgcgcggtatggcgcgcacccggcgcgtcggt
cacgcgggcacgctcgacccgatggcgacgggcgtgctcgtcctcggcaccgagcgggcg
acccggctgctcggtcacctcgccctcaccgagaaggagtacgtggccaccgtccggctc
ggtcaggagacggtgaccgaggacgccgagggcgagatcaccggcgcccagggcgccaag
gggctggagcgggcacgcgtggacgccgccgtggccgcgctgacgggccggatcgagcag
gtcccctcagcggtcagcgccgtcaaggtcgacggcaagcgtgcctacgcgcgggtgcgt
gagggcgaggaggtggaactggccgcacggccggtcaccgtctcctctttcctggtgcac
gacgtgcgcgaggaggcggccgaggacggcaccccggtcaccgacctgctggtctcggtg
gtctgctcgtccggcacgtatgtgcgggcgctcgcccgggacctgggagcggccctcggt
acgggcggccatctgacggcgctgcggcgcacccgcgtcgggccttacgggctggacggc
gcgcacacgctggcacagctccaggagcgggtggacgcggaacagccgttgcctgtcctc
ccgctggggcaggccgcggcggcggcgttcgcacgctgggacgtcgacgaggaccaggcg
cgccgcatcgggaacggcgtacaactgcgcatgccgacggcgcagttcggtcccggccct
gtcgcggtgttcgctccccaggagcggttcgtcgctctggtggagcagcgggacggcaag
gccaggagcctggccgtcttcgtgtga
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integrated database retrieval system
