Streptomyces tubbatahanensis: MMF93_25295
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Entry
MMF93_25295 CDS
T08938
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
stub
Streptomyces tubbatahanensis
Brite
KEGG Orthology (KO) [BR:
stub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stub03032
]
MMF93_25295
03400 DNA repair and recombination proteins [BR:
stub03400
]
MMF93_25295
Enzymes [BR:
stub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MMF93_25295
DNA replication proteins [BR:
stub03032
]
Prokaryotic type
DNA Topoisomerases
MMF93_25295
DNA repair and recombination proteins [BR:
stub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MMF93_25295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
Motif
Other DBs
NCBI-ProteinID:
UNS99401
LinkDB
All DBs
Position
5861610..5863733
Genome browser
AA seq
707 aa
AA seq
DB search
MTADMSVPSTALLTGADREGGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWE
IIDNSVDEALGGYCDRIEVILHEDGSVEVTDNGRGIPVDIEPKTGLPGVEVVMTKLHAGG
KFGGGSYAASGGLHGVGASVVNALSSRLDVEVDLNSRTHTISFRRGVPGIFTEPGPEAPF
DPSSGVLKGKKIPKTRTGTRIRYWSDRQIFLKDAKLSLDTLYARARQTAFLVPGLTLVVR
DERGLDGEDVSEETFHYDGGISEFCEYLAPDKPVCDVLRLQGQGTFKETVPVLDDRGHMT
PSEVQRELGVDVALRWGAGYDTTVKSFVNIIATPKGGTHVAGFERAVTKTVNEALRTNRL
LKVADDDVVKDDATEGLTAVVTVRLAEPQFEGQTKEVLGTSAASRIVAQVVAKELKAFLT
SSKRDAKAQARSVLEKVVAAARTRIAARQHKEAQRRKTALESSALPAKLADCRADDIDRT
ELFIVEGDSALGTAKVARNSEFQALLPIRGKILNVQKSSVSDMLKNAECGSIIQVIGAGS
GRSFDIDQARYGKVIFLADADVDGAHIRCLLLTLFQRYMRPMVEEGRVFSAVPPLHRIEL
INPKKGQEKFLYTYSDNELRQTLLELERKGTRYKESIQRYKGLGEMDADQLAETTMDPRH
RTLRRINISDLEAAEEAFSLLMGSEVAPRREFISSSAATLDRSRIDI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgacatgtccgtgccgtccaccgcactgctgaccggggcagaccgtgagggc
ggttccaattacaccgcgcggcatctgctcgtcctggagggcttggaggccgtccgcaag
cggcccggcatgtacatcggctcgaccgacagtcgcggcctgatgcactgcctgtgggag
atcatcgacaactccgttgacgaagccctggggggctactgcgaccggatcgaggtcatc
ctgcacgaggacggctcggtcgaggtcaccgacaacggccggggcatccccgtcgacatc
gagccgaagacgggtctccccggcgtcgaggtcgtgatgaccaagctgcacgccggcggc
aagttcggtggcggctcctacgcggcctccggcggactgcacggtgtcggcgcttccgtg
gtgaacgcgctctcctcgcgcctggacgtcgaggtcgacctgaacagtcgcacccacacc
atcagcttccgtcgcggtgtgcccggcatcttcaccgagccgggacccgaggcacccttc
gatccctccagcggggtgctcaagggcaagaagattcccaagacgcgtacgggcaccagg
atccgctactggtccgaccggcagatcttcctcaaggatgccaagctctccctggacacg
ctgtacgcacgtgcccgtcagaccgcgttcctggtgccagggctgacgctggtcgtgcgg
gacgagcggggtctggacggcgaggacgtctcggaagagacgttccactacgacggcggc
atcagcgagttctgcgagtacctcgcacccgacaaaccggtctgtgacgtactcaggttg
cagggccagggaacgttcaaggagaccgtgccggttctcgacgaccgcgggcacatgacc
ccctcggaggtccagcgggagctcggtgtggatgtcgcgctgcgctggggggccgggtac
gacacgacggtcaagtcgttcgtgaacattatcgcgacgcccaagggcggcacgcacgtc
gccggcttcgagcgcgctgtcaccaagacggtcaacgaggcactgcgcacgaacaggctg
ctgaaggtcgccgacgacgacgtcgtcaaggacgacgccaccgaaggactcaccgccgtg
gtgaccgtccggctggccgagccgcagttcgaagggcagaccaaggaggtgctgggaacc
tccgcggcctcgcgcatcgtcgcgcaggtggtggccaaggagctgaaggccttcctgacc
tcctccaagcgggacgccaaggcgcaggcccgctccgtgctggagaaggtcgtcgccgcg
gcacggacacggatcgccgcgcggcagcacaaggaggcgcagcgccgcaagaccgcgctg
gagtcctcggcgctgcccgccaagctggccgactgccgtgccgatgacatcgaccgcacc
gagttgttcatcgtcgagggtgactccgcgctcggcaccgcgaaggtggcgcggaactcc
gagttccaggcgctgctgccgatccgcggcaagatcctcaacgtgcagaagtcgtccgtc
tccgacatgctcaagaacgccgagtgcggctcgatcatccaggtcataggagccgggtcg
ggacggtccttcgacatcgaccaggcccgttacggcaaggtcatcttcctcgccgacgcc
gatgtggacggtgcccacatccgctgcctgctgctcacgctcttccagcgctacatgcgg
ccgatggtggaggagggccgggtcttctccgcggtgccgccgctgcaccggatcgagctg
atcaacccgaagaagggccaggagaagttcctgtacacctactcggacaacgagttgcgc
cagacgctgctggaactcgaacgcaaggggacgcgttacaaggagtccatccagcgctac
aaggggctgggcgagatggacgccgaccagttggcggagacgacgatggacccgcgccac
cgcacgctgcgccgcatcaacatcagcgacctggaggcggccgaggaggcgttctccctg
ctgatgggcagcgaggtggctccgcgccgggagttcatcagctcctccgccgccacgttg
gaccgctcccgcatcgacatctga
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