Schaalia turicensis: G5S47_01985
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Entry
G5S47_01985 CDS
T07393
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stuc
Schaalia turicensis
Pathway
stuc03420
Nucleotide excision repair
stuc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5S47_01985
03430 Mismatch repair
G5S47_01985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stuc03400
]
G5S47_01985
Enzymes [BR:
stuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5S47_01985
DNA repair and recombination proteins [BR:
stuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5S47_01985
MMR (mismatch excision repair)
Other MMR factors
G5S47_01985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QYB15748
LinkDB
All DBs
Position
463410..465446
Genome browser
AA seq
678 aa
AA seq
DB search
MNLPDPNALLDALDPDQRAVALQVKGPLAVRAGAGTGKTRAITYRIAYGVATGAFTPHSV
LAVTFTRRAAFEMGQRLTQLGVPGVPARTFHSAALSQLKFFWPTAIGGQIPELIPSKSSL
VYPVMSRLGIAQGNVEFRDVVAEIEWAKVSMVNAERYGEVVRDGHPVPDGLSADEMATIL
RLYEDAKRERGAIDFEDVLILMAAIMQDRPDVARQVRNQYQNFVVDEFQDVSRLQQSLLD
LWVGDRHDVCVVGDVAQTIYSFAGAQSSFLVDFPKKFKGAHVLELTRDYRSTPQIVDVAN
SVMLGAGKTSGTVTLSSQRPSGAHVEFASYSSDREEAEAIASKIQELIHRGTPAHDIAVL
LRINAQSELYEEVFSARQIPIALQDETPFFDRESVRRAVSHLIAVSKSGQDSPGSLRDQI
EEHLEAIGWTPQAPNGANALERWNNLNTLIALATDSSAPDLAGFIEELTHKRKVAEEPNK
EGVEVMTLHSAKGLEWSAVFMPGLSEGLLPISYAKTPEAIEEERRLLYVGITRARDILEL
SWARSRRDGDRSKRKRSRLLNSVWPQSPSIKTKKPAHAHASSSKQATREFQATASKETLD
LFEALRSWRSDVAKLAGKPPYTVFSDVTLRELATRRPKNHRELLGISGIGEIKADAFGSS
VLAILDGETVEVTKDDLL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgccagacccgaatgctcttcttgacgcgcttgacccggatcagcgcgctgtt
gccctgcaagtgaaagggccattggctgttcgtgctggcgcagggacggggaaaacacgt
gcgatcacctatcgcattgcgtacggtgtggcaacgggtgcgttcacgccacattcggtt
cttgcagtgacgttcacgcgtcgcgctgcttttgaaatggggcaaagacttacccagctt
ggcgttcccggagttcctgctcgaaccttccattcggctgcactcagtcagctgaaattc
ttctggccaacagcaattggtggtcagattccagagctcatccccagtaaatcatcgctt
gtttatcccgtgatgtcccgccttggaatagcgcagggaaatgttgaattccgcgatgtt
gttgccgaaattgaatgggcgaaagtgtcgatggttaacgcagagcgctatggcgaagta
gtgcgcgacggacaccctgttccagatggcttaagcgctgatgagatggcaacgatactt
cgcctgtatgaggacgctaagcgcgaacgtggtgcgatcgattttgaagacgtccttatt
ttgatggccgccatcatgcaggatcgtcctgacgttgctaggcaagtgcgtaaccagtac
cagaacttcgtggttgatgaattccaggatgtgtcacgcctgcaacagtcgttgttggat
ctatgggtcggtgatcgtcacgacgtgtgtgtcgttggcgatgttgcccagacaatttat
tcatttgcaggtgctcaatcatcatttcttgttgatttcccaaagaaattcaagggcgcg
cacgtccttgaactgaccagagattatcggtcgacccctcaaattgttgatgtcgctaac
tcggtcatgctgggggcaggaaaaaccagtggcactgtcacgctcagctctcaacgacct
tcgggtgcgcatgttgaattcgcaagctattcgtcagatagggaagaagctgaagccatc
gcgtcgaagattcaagaactcatacatcgtggaacacctgcccacgatatcgctgtcctc
cttcgtatcaacgctcaatccgaactctacgaagaagtgttttcagcgcgtcagatcccg
attgctcttcaagatgagactccattctttgatagagaatcagttcgccgtgcagtcagc
catctgatcgcggtgtcgaagtctggccaggattcccctggctctctgcgcgaccaaata
gaagaacacttggaagccatcggctggacgcctcaagctcccaatggagcaaatgcgctt
gaacgctggaataacctcaatacgctgatcgcattggctactgattcatctgctccggat
cttgctgggttcattgaagagctcacgcacaagcgcaaggtagcagaagagccgaataaa
gagggcgtggaagtcatgactcttcactcggcgaaggggctggaatggtcagccgttttt
atgccggggctcagcgaaggtctgctccctatttcctacgctaagacccccgaagcaatc
gaagaagaacgtcgccttctctacgttggtatcactcgtgcgagggacattcttgagctc
tcgtgggcgcgaagccggcgtgacggggatcgttcgaagcgtaaacgtagtcgcctgctg
aacagcgtgtggccacagagcccctcgataaagacgaagaagcccgctcacgctcacgca
tcatcatcgaagcaagcgacacgtgagttccaagcaacagcgtcgaaagagaccctcgat
cttttcgaagccctccgctcgtggcgaagtgatgttgcaaagctcgctggtaagcctccc
tatacggttttttcggatgtcacgcttcgtgagcttgcgacaaggcgtccgaagaaccat
cgtgagcttcttgggatttccggcatcggcgagatcaaagcagatgcgttcggatcatcc
gttttagcgatcctggacggcgaaacagttgaagtgactaaggacgatcttctttaa
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