Schaalia turicensis: G5S47_02305
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Entry
G5S47_02305 CDS
T07393
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
stuc
Schaalia turicensis
Brite
KEGG Orthology (KO) [BR:
stuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stuc03400
]
G5S47_02305
DNA repair and recombination proteins [BR:
stuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G5S47_02305
Archaeal homologous recombinant proteins
G5S47_02305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_27
TMF_DNA_bd
Med14
AAA_21
ABC_tran
DUF5847
DUF3450
Motif
Other DBs
NCBI-ProteinID:
QYB15803
LinkDB
All DBs
Position
complement(543233..546358)
Genome browser
AA seq
1041 aa
AA seq
DB search
MKLIRIEFAGIGPFSGKETIDFTRFDDSGLFLLEGPTGAGKSTILDAITFALYGIVARGS
DSTKDRLRSDHVPAKAKSYVELVFEVSEGFFKVYREPTYIPEGNKTARNGQLTLIQVHPV
ESADGHFTYVDGDPVGRNAAEMNQWITQAVGLTKDQFVQTVVLPQGKFADFLMAKSEQRE
ALLKDIFNTHLFTTFQKKLAEVSKQHSDDVVEAEREVTRRFSDLESLYGHLQDFIRPADA
DSSHDSAFLASQDSPSSFADVDPLDPDSQQASTLAITLAQSAHRVCDEEEAKLPGLIDIA
EECHRKLEATRALNSLVEERMELQSHLEMLMEHALIIDQYKKRHSDALIASSLSGPVRQF
TDARDYMSVKNTELLTAHRQLRSRFTTLSHIEEDSLSSHMVDELLEELSTIVEALSAKKA
TLENLTSLEHELSNEREEQEALTASLAVLTQKRTQLEDQLSQLPKMRESALQGRENMLKD
LELFATGERDMALLQPRYQAACEVAEHIEILKIRAKNIQSARRRAQEANIASLQAHMRWM
DHASGSLATQLEDGKPCPVCGSVEHPAPARIDQTDAVTLEDLDAVDQARSKAEQELNEAH
MLHAQTNQAIASGNTIARADKASLELEIKNAQERIDKHSALSQTIKELDQALAELEQNIS
RVKDELAETKVEIGKAQTQHSSLAQSIDTKQARCEEGRGTFESIEAHLANVSDSLTEART
HHKHLQEWNQSYARLETTTNALTQALTDSPCASIEEALAFVDSHFIAGEELRALKDQIDS
HQSDLQITRNQLLDKRLANVADRSVQSTAALEEADTNATAARDAMQHRCGQLSALVGQID
DAHTHFKTAVAELDHVRAEVAPYQRLVNIVNGGSLNLSSTPLSSWVLVSRLNEVLDATNP
RLNAFSGGRYQLICRPEDGTRSKKSGLGLAIHDLETDHIRKTQTLSGGETFYTSLALALG
LVDIVTAESGGTEIKSMFIDEGFGSLDSDTRDVVMHHLHALRQSGRTVGVISHVEEMSKQ
ISDQIHVRPKANGGSSLSIDF
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgattcgtatcgagttcgcaggaatcggccctttctctggaaaggaaacgatc
gatttcacccgattcgacgactccggtttgttcctgcttgaaggacccaccggggctgga
aaatcaacaattcttgatgcgattacatttgcattgtacggaattgttgcgcgcggaagc
gactcaacgaaggatcgcttgcgttctgaccatgttccggccaaagcgaagtcctatgtc
gaactagtctttgaagtctccgaaggtttcttcaaggtctaccgagaacccacatatatc
cccgagggcaataagactgcgcgtaacgggcagctgacgttgattcaggtacaccccgtc
gaatcagccgatggccattttacctacgttgatggggatcccgtcggccgtaacgccgcc
gagatgaatcagtggatcacgcaagcggttggtctgacaaaagaccagttcgttcaaacc
gtcgttcttcctcaaggaaagttcgctgatttcttgatggcaaagtcagagcaacgtgaa
gcgcttctgaaagatattttcaacactcatctttttacgaccttccaaaagaagcttgct
gaagtatcaaaacaacattcagatgacgtagtagaggcagaacgcgaggtcacccgtcgt
ttcagcgatctagagagcctgtacggacaccttcaggacttcattcgccccgcagatgct
gattcttcccacgattctgctttcttagcttcacaggattccccctcatcatttgcggat
gtcgatcctcttgaccccgattcacagcaggcatcgacgctggcgatcactctcgcccag
agtgctcatcgcgtatgcgatgaagaagaagccaagctccctgggttgatcgatatagcc
gaagaatgtcaccgcaagctcgaagctacccgcgccttgaactccttggttgaagaacgc
atggaactccaatctcacttggagatgctgatggagcacgctttgatcattgatcagtac
aagaagcgtcattccgatgctcttattgcttcctcgctctctgggccggttcgtcaattc
accgacgctcgcgactatatgtcagtcaaaaataccgagcttctcactgcgcatcgtcag
cttcgctcacggttcacgaccctttcgcatattgaggaagattctctttcctctcacatg
gttgacgagcttttagaagaactcagcaccattgtggaagctctcagtgccaagaaagca
actcttgagaacctcacgtcactcgagcacgaactcagtaatgaacgcgaagaacaagag
gcattaacagcctcacttgctgtactcacccagaaacgcacccagcttgaagaccagctt
tcccagcttcccaaaatgcgtgaaagcgcccttcagggacgcgaaaacatgttgaaagac
ttggagctcttcgcaacaggcgaacgcgacatggcgctcttacaaccgcgttaccaggct
gcgtgtgaagtcgctgagcatatcgaaatcctcaagatcagggctaagaacattcaaagt
gctcgtcgccgggcgcaagaagctaacatcgcttccctccaagcacatatgcggtggatg
gatcatgccagtggcagtcttgccacccagcttgaagacggcaagccctgccctgtttgt
ggttcggtggagcatccagctccggcacgtatcgaccagacggacgctgtcaccctcgaa
gaccttgatgctgtcgatcaggcgcgttcgaaagcagagcaggaattgaacgaagcacat
atgcttcacgctcagaccaaccaagccatagcgagcggaaacacaattgcacgtgcggat
aaagcttcgttggaactcgaaatcaagaatgctcaagaaagaatcgacaagcattcagcg
ttgtctcaaacgatcaaggaacttgatcaggctctggccgaacttgagcagaacattagc
cgtgtgaaagacgagctcgctgaaaccaaggtggaaattggcaaggcgcagacacaacac
tcttcgcttgcccaatcaatcgatacgaagcaggctcggtgtgaagaaggccgtggaacc
tttgaatcaatcgaagcgcatctggcgaatgtcagcgattctttgactgaagctcgcacg
catcacaagcacctccaagagtggaatcaaagctatgcgcgccttgaaactacaacgaat
gcgctgacgcaggctctcactgattcgccgtgcgcttccatcgaggaagccctcgctttc
gttgattcacatttcatcgctggcgaagagctccgtgcattaaaggaccagattgactcc
catcagagtgatcttcagataacgcgaaaccaactcctggacaaacgtcttgccaatgtt
gctgatcgaagtgtgcagtctacggcggccttggaagaagcggataccaatgcgacggct
gcgcgcgatgccatgcaacaccgctgtggtcagctcagtgctcttgtgggacagattgac
gatgctcacacgcactttaagaccgccgtggcagagctcgaccatgtccgagcagaagtt
gctccgtaccagcgtcttgtgaatatcgtcaacggtggatctctcaatctcagttcgact
cccctatcatcatgggtgctagtgtcgcgtctcaatgaggttttggatgcgacgaatcct
cgtctcaacgcattctccggtggtcgctaccaactgatctgcaggccagaagatggcact
cgttcaaagaagtctgggttggggttggcaattcacgatctggaaacagaccacattcgc
aagacccaaacgttgtccggtggcgaaacgttctatacctctctcgcactggcgttgggg
ttggttgacattgtcactgctgaatcggggggcacggaaatcaaatcgatgttcatcgat
gaaggattcggctcattggactccgatacgcgtgatgtcgtcatgcaccacctgcatgcg
ttgcgccagagtggtcgaaccgttggtgtcatcagccacgtcgaagagatgtcaaagcag
atcagcgatcagatccatgttcgccccaaagcaaacggtggttcaagcttgtcgatcgac
ttctga
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