Schaalia turicensis: G5S47_02425
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Entry
G5S47_02425 CDS
T07393
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
stuc
Schaalia turicensis
Pathway
stuc00300
Lysine biosynthesis
stuc00470
D-Amino acid metabolism
stuc01100
Metabolic pathways
stuc01110
Biosynthesis of secondary metabolites
stuc01120
Microbial metabolism in diverse environments
stuc01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
stuc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G5S47_02425 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G5S47_02425 (lysA)
Enzymes [BR:
stuc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
G5S47_02425 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QYB15824
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Position
572553..574004
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AA seq
483 aa
AA seq
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MGEAPASFDARPIGDLICPEPDQRPDMWPWSAKRLDNGVLEIGGVSLTDLADGFATPAFV
LDRADLAGRANVWATAMAEEFWDGYGMNGGDAFYAGKAFLSSDVVRVVTDAGMGVDTASL
GELTMVLRSGANPAKVGLHGNNKLDSEIERALLAGNKEGIERIFIDSLYEVGQIERIAQK
LGVVARVMVRVKTGVHAGGNEYISTGHEDQKFGVGAFDGQLDEVVDSIASSDHLELRGLH
SHIGSQIIGIDAFVEAATIICRLAKQIQERTGLTIPDIDLGGGAGVAYTGDDETPTSPIE
IARAIAGAVRDVCAELDFPVPHVSVEPGRSVVGPAMVSLYRVGAVKDATLGDGLKRRYIA
VDGGMADNIRPALYGARYTATLANRVSDVEPVRSRIVGKHCESGDVIVWDVDLPSDVHAG
DLLVIPVTGAYGYSMASNYNMLTKPGVIAVESGQARWIMRPQTIDDLLELDTGLASLATA
NDT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgggggaagcgccagcatcgtttgacgcccgccccatcggggacctgatttgcccagag
cccgatcaacggcccgacatgtggccttggtcggccaagcgccttgacaatggtgttcta
gaaatcggtggagtttctttgacggaccttgccgatggctttgccacgcccgcgtttgtc
ctcgatcgcgctgatcttgctggacgcgcgaatgtctgggcgaccgcgatggccgaagaa
ttctgggacggctacggaatgaatggcggtgacgccttctacgccggcaaggcattcctt
tcatccgacgtagtccgtgtcgtcacggacgcagggatgggagtcgatacggcttccctc
ggcgagctgacaatggtgttgcgctccggcgcaaaccccgccaaagtggggttgcacggg
aacaacaagcttgatagcgaaatcgaacgtgcgctgttggcaggcaacaaagaaggtatc
gagcgaatcttcatcgattccctctacgaagtcggccagatcgaacgcatcgctcagaag
ctgggcgtcgtcgcacgtgtcatggtgcgcgtgaagacgggtgtgcatgcgggtggaaac
gaatacatttccaccgggcacgaggatcagaagttcggcgttggtgccttcgatggtcag
cttgacgaggtcgttgactcgattgcctcctcggatcatcttgagttgcgaggcctgcac
tcgcatatcggctcgcagatcatcggcattgacgcattcgttgaagcggctacgattatc
tgccggctggcgaagcagatccaggagcgtaccggcctgacaattcccgatattgatctt
ggcggtggggctggcgttgcctatacgggtgatgacgaaacaccgacttcgcctattgag
atagcgcgcgcaattgcgggtgcagtgcgtgacgtgtgcgctgagctggacttccccgtt
ccacacgtttcagttgagcctgggcgttcggttgttggacccgcgatggtgagcctctat
cgcgttggggccgtaaaagacgcgaccctaggagatggcctgaagcgtcgctacatcgcg
gtcgatggggggatggctgacaatattcgaccggctttatacggggcacgctacacggcg
acgctcgcgaatcgtgtgtccgatgtcgaaccagtgcgctcgcgaatcgtgggcaagcac
tgcgagagtggcgacgttatcgtctgggatgttgatcttccgagtgatgtgcacgccggg
gaccttctcgttatcccggtgaccggcgcctacggttattcgatggcatcgaactacaat
atgctgaccaaaccgggtgttattgctgttgaaagcggtcaagcgcgttggatcatgcgt
cctcaaaccattgatgacctgctggaactcgatactggacttgccagccttgccaccgcc
aacgacacgtag
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