Schaalia turicensis: G5S47_02570
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Entry
G5S47_02570 CDS
T07393
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stuc
Schaalia turicensis
Brite
KEGG Orthology (KO) [BR:
stuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stuc03016
]
G5S47_02570 (truB)
Enzymes [BR:
stuc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G5S47_02570 (truB)
Transfer RNA biogenesis [BR:
stuc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G5S47_02570 (truB)
Prokaryotic type
G5S47_02570 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QYB15846
LinkDB
All DBs
Position
605816..606844
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AA seq
342 aa
AA seq
DB search
MAKKPDTSIPGIVIIDKPAGMTSHDVVSKMRRVAHTRKVGHGGTLDPMATGVLVIGIGQA
TRLLTYITAGSKAYDATIRFGVAMTTDDAQGQPISIAGCEQLDREALESAMASLRGEIMQ
VPATVSAIKVDGKRAYALAREGRSVELKARPITIHAFERLGDPRIQMAEYAIATDDDSAE
MTAIPVSVVDVDVHVDCSSGTYIRSLARDLGQMLGCGAHLTALRRTRVASFTLSGAHQLA
DLQAEAEARGEFSPGAPSLPSPGLIPIAEAATSLFPSIVLSAEEEQRFSHGQAPTRDAQE
VMALGNPGDVIAACNTSGVLCGVLAIKNHSLKTLNVFSGETQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaagcctgacacttccatcccaggcatcgttattatcgataagccagctggg
atgaccagccacgatgtcgtgtcgaagatgcgacgcgtggcgcatactcgtaaggtcggc
cacggaggaacccttgatccgatggcgaccggcgttttggtaatcggcatcggtcaagca
acgcgactgctgacctacattaccgccggatcgaaggcttatgatgcgacgattcgtttc
ggcgttgcaatgaccacggatgatgcgcaaggccagccgatttcgattgccggatgcgaa
cagctggaccgagaagcgctcgaatctgcaatggcaagcctgcgcggtgagatcatgcag
gttcctgcaacggtctcggcgatcaaggtcgatggcaagcgagcctacgcgttagcacgt
gaaggccgctctgttgagctgaaagcgcgtccgattacaatccacgccttcgaacgactg
ggcgatccgcgcattcaaatggcggagtatgcgattgctacagatgatgattcggctgaa
atgacggctattccagtcagtgtcgttgatgttgacgttcacgtcgattgctcgtctggc
acgtatattcgttccctcgcccgcgacctcgggcagatgctggggtgcggcgcgcacctg
acggcattgcgtcgtacgcgtgttgcctcgttcaccctttcgggcgcccaccagctggct
gatctgcaagcggaagctgaagcgcgaggggagttttcgccaggcgcgccctcgttgccg
tctcccggcctgattccgattgccgaggccgcgacctcgttgttcccctccattgttctg
agcgcggaagaagaacagcgtttctcccatggtcaggcaccgacgcgtgacgcgcaggaa
gtcatggcattagggaaccccggcgatgtcatcgcagcatgcaatacatctggagtgctc
tgtggggtgctggccattaagaatcattctttgaagactctcaacgtattttctggagaa
acacaatga
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