Schaalia turicensis: G5S47_04300
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Entry
G5S47_04300 CDS
T07393
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
stuc
Schaalia turicensis
Brite
KEGG Orthology (KO) [BR:
stuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stuc03016
]
G5S47_04300
Enzymes [BR:
stuc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
G5S47_04300
Transfer RNA biogenesis [BR:
stuc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G5S47_04300
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QYB16145
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Position
1002731..1003972
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AA seq
413 aa
AA seq
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MHIHHTGGLPDGDTDSPELIVTPREGVPSVIDTPDALDQARRNLEQGLTPIAVDVERAQG
FRYGNDPYLVQIRREDVGTFLIDTAALPDLSSLQAGVNDVWLLHDALQDLPNLRQVGLNP
PSLFDTEVGARLLGLKKFGLAAVCEQVLGLSLVKDHQASNWSVRPLSKDWLRYAALDVEL
LTELYRRLSIQLNDAGRWEWMEEECDYLAHLDPPAPKRDRWRNLPGAGKIRGRRNLGVLK
ALWEAREEIAQELDKAPGRLVRNAALVQAALNPPRNKRMLLSISEFRSPVARQYADRWLR
AIRLAETANEDELPPLRLPHRPGSVPEARNWGRIDPDAAARLAAVRGAMTELSEEIGIAP
EVILEPRIQRYLAWAPLDPKRPSGDEIEQRMFDKGARDWQMDLCLDPIADVLE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgcacattcaccacaccggcggtttacctgacggcgatactgattctccagagctgatc
gttaccccgcgcgaaggcgtacctagtgtcatcgatacacctgatgcgcttgatcaagcg
aggcgcaacctagagcaaggactcactcccatcgctgtggatgttgagcgcgcccaaggc
ttccgttacggcaacgacccctacttggttcagattcgacgcgaagacgttggtaccttc
ctgatcgatacagccgcattgcctgacttgtcgtcgcttcaagcgggcgtgaacgacgta
tggcttttgcacgatgcgttgcaggatctgccgaatttgcgacaggtgggactcaatccc
ccgtcgttgtttgatactgaggtcggcgcgcgtcttctggggttaaagaagttcggtctt
gctgccgtatgcgagcaggtgctcggtttgagcctcgtgaaagaccaccaggcatctaac
tggtcggttcgtccgctatcgaaggactggcttcgctacgcggccctcgatgtcgaattg
ttgacggaactttaccgtcgcttgtccatccaactgaacgacgcgggtcgctgggagtgg
atggaagaagaatgcgactacctggctcacctggatccgcctgcgcccaagagggaccgc
tggcgaaatctgcccggcgcgggaaagatacgaggccggcgcaacctaggagtcctcaag
gctttgtgggaggcgcgcgaagaaatcgctcaggaacttgataaggcacccggtcgtttg
gtgcgcaatgctgctctggtgcaggctgcgctgaatcctccgcggaataagcgtatgttg
ctgtcgatttctgagttccgctcccctgttgccaggcaatacgctgaccgttggttacgc
gcgatccgactggccgaaacggcaaatgaggacgaattgccaccgctacgtcttcctcat
cgtccaggttcagttcccgaagcgcgaaactggggtcgtatcgatcctgacgctgcagcg
cgattggcggctgttcgcggggcaatgaccgagctttctgaagaaatcggtattgctccc
gaggtcattcttgaacctcgtattcagcgttacttggcgtgggcgcctcttgatccgaag
cgtcccagcggcgacgagattgaacagaggatgtttgacaagggcgctagggattggcag
atggacctttgtcttgacccgatcgcggatgtcttggagtga
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