Schaalia turicensis: G5S47_06645
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Entry
G5S47_06645 CDS
T07393
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stuc
Schaalia turicensis
Pathway
stuc03420
Nucleotide excision repair
stuc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5S47_06645
03430 Mismatch repair
G5S47_06645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stuc03400
]
G5S47_06645
Enzymes [BR:
stuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5S47_06645
DNA repair and recombination proteins [BR:
stuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5S47_06645
MMR (mismatch excision repair)
Other MMR factors
G5S47_06645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QYB16560
LinkDB
All DBs
Position
complement(1510409..1513348)
Genome browser
AA seq
979 aa
AA seq
DB search
MTDFTSLPDLGSASFSEWGGVPEPGPESPVYDFPGGSVLGEDVVPVLDETEYFSQANRTS
SKSAFGYSGNGSEEPSDWQSRPRFSEPDELIRELNDQQREAVVHDGGPLLIMAGAGSGKT
RVLTHRIAYLLATGRATQGQILAITFTNKAAAEMRERVGGLVGHGAAYMWVSTFHSACVR
ILRREHEAAGLTSSFTIYDAQDAQRLIQMILKSMDVDVKRYSPKMIAAKISDLKNELITP
AKYEETCANDPISKIVANTYREYSKRMRESNALDFDDLIMATVQLLKDKPLIAQQYHRRF
RHILVDEYQDTNHAQYVLVRLLVGDGDDGVEPGELTVVGDSDQSIYAFRGATIRNIEQFE
RDFPGARTILLEQNYRSTQNILSAANAVIARNQGRRPKNLWTASGDGALITLDAADSEHD
EARFVVSEVDRLADQGASYGDVAVFYRTNAQSRAIEELLVRQGIPYRVVGGTRFYERKEI
KDALAYLQAISNPDDSVAVRRIINVPRRGIGAKAEDAIAVHASRYGISFGQAVRDVWESE
GCPLGESEGIEWQYPTVSQSDATSLVDVATSSDSPSGKPFPSNATDLGKQTSEPSLVESE
TPGAIVDNALSAWADVEVRTFEQNPPDAQDVNSASSIGNLPSRQLPPSGEQREVLGLSPR
ARKSIAAFWGLIESTRQASEKGVSTADILEEILDKTGYLATLRKSEDPQDASRVENLAEL
HSVAIDFAHVNPRGSVVDFLERVALVADSDQIPSEDQRSGQVTLMTVHTAKGLEFPIVFV
TGMEDGTFPHQRSLGDESELAEERRLAYVAITRARERLYLTRASIRSAWGSPQEMLPSQF
LADIPPELCDIRRSSTASERLRSRENSWGSGWGSGSYSSHTGRALDDDGPVFGSGKAETA
SRVTGIRTGKTIRMGAQQTSRNTHRPLLDLKVGDRVKHASLGEGTVVGLEGQGKTTVARV
KFSEAEKRLLLRVAPLEKI
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttcacttctcttcccgatcttggctccgcttcattctcagaatggggcggt
gtgccagaacctgggcctgagtcgccggtgtatgacttccccggcggatccgttctaggt
gaggatgttgtgcccgttttggatgaaactgagtacttctctcaggcgaataggaccagc
tcgaaatctgcgttcggctattcgggcaatggaagtgaagaaccttcagactggcagtcc
cggcctcgtttttctgaaccggacgaactcattagagaactcaacgatcagcaacgcgaa
gctgtcgtccacgacggtggaccgctactgattatggcgggcgcgggatctgggaaaacg
cgcgtgcttactcaccgaattgcctaccttcttgctacagggcgagccacacaagggcag
attcttgcgatcacgttcaccaacaaagccgccgcagaaatgcgtgaaagggttggcggg
ctggtcggtcatggcgcggcgtatatgtgggtttcgacgttccattcggcctgcgtgcga
atcctgcgacgtgagcacgaggccgccggtctgacttcgtcgttcaccatttatgacgcg
caggatgctcagcgactcattcaaatgatcctgaaatcgatggatgtcgacgtgaagcga
tactcacccaaaatgatcgcggccaagatttcagatctaaaaaatgaactgattactccc
gccaaatacgaggaaacctgcgcaaacgacccaatttcaaagatcgtcgcaaacacctat
cgcgaatactcaaagagaatgcgcgaatcgaatgcgctggacttcgatgatctgatcatg
gcaacggtgcagttgctgaaagacaagccactgattgctcaacagtatcatcggcgcttc
cgccacattctggtggatgagtatcaagacacgaaccatgcgcagtatgtcctggttcgc
ctacttgtcggcgatggcgatgacggagtagaacccggtgagctcaccgtggttggtgac
tcagaccagtcgatttacgccttccgcggtgcaacaatccgcaacattgagcagtttgag
cgcgattttccgggtgctcgcacaattcttctggagcagaattatcggtcgacacagaat
attctctctgccgcgaatgcagtgatcgcgcgcaaccaagggcgtcgaccaaaaaacctg
tggacagcttcaggcgatggtgcgctcatcactcttgacgcagctgattctgaacatgat
gaagcacgttttgtcgtgtctgaagttgatcgcctggctgatcagggtgcttcatatggt
gatgttgcagtcttttaccgtacaaacgcccagtcacgtgccattgaagaactccttgtg
cgtcaaggaattccctaccgcgtggtcggcggaacacgattctacgagcgcaaagaaatc
aaagatgcgctggcctacctgcaagcgatctccaatcctgatgacagcgttgccgtccgc
agaattatcaacgttccgcgtcgtgggatcggcgcaaaagctgaagacgctatcgcagtc
catgcttctcgatacggtatttccttcggccaagctgtccgagacgtctgggaaagcgaa
ggatgcccgctgggtgaaagtgaaggtattgaatggcaatatccgacggtcagtcaaagc
gatgcgacatcgctcgtcgatgttgccacctcttctgattctccttcgggtaaacctttc
ccatcgaacgccacagacttagggaaacaaacaagcgagccttcccttgttgagtctgaa
acaccgggggccatcgtagacaatgcgctcagtgcgtgggcagacgtagaggtacgtaca
ttcgagcaaaatccgccggatgctcaagatgtaaactcggcctcgtcgatcggaaatttg
cccagccggcagttgccccccagtggtgaacagcgcgaggtccttggcctttctccgcga
gcgcgaaagtcgattgctgcgttctggggtcttatcgaatctactcggcaagcaagtgaa
aagggtgtgtcgactgccgatatcctcgaggagatcctggataagactggatacctcgct
acgctacgaaagtcggaggatcctcaggatgcttcgcgcgtggaaaaccttgcagaattg
cactcagtagcgattgatttcgcgcacgtgaacccgcgcggtagtgtggtcgacttcctt
gagcgagtcgcactcgttgcagattcggatcaaattccatctgaagaccagcgaagtggt
caggtgacgttgatgacagtgcatacagcgaaggggctggaattccccatcgtgtttgtc
accggcatggaagatgggaccttcccgcatcaaaggtcgcttggggatgagtctgagctt
gcggaagagcgtcgccttgcgtacgtggcaattacgcgtgcgcgtgagcgactgtatctg
actcgagcctctattcgctcagcttggggtagtccgcaagagatgttgccgtcccagttc
ctcgcagatattccgccggagctatgcgatattcgccgatcctcaactgcaagtgaacga
ctgcgttcgcgcgaaaactcctgggggagcggatggggatcgggctcctactcttcgcac
accggtcgtgccttggatgatgatgggccagtttttggctccggtaaagcagaaactgcc
tctcgagtcacaggtattcgaaccgggaaaaccatacgcatgggtgcgcaacaaacgtca
cgcaatacgcaccgaccactccttgacttgaaggttggcgatagggttaaacacgcgagt
ctgggggagggaactgttgttggcctcgaaggtcaggggaaaacaacggttgctcgggtc
aaattcagcgaagcggagaagcgcctgcttcttcgagttgcacccctagaaaaaatctga
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