Schaalia turicensis: G5S47_07830
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Entry
G5S47_07830 CDS
T07393
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
stuc
Schaalia turicensis
Pathway
stuc03030
DNA replication
stuc03430
Mismatch repair
stuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G5S47_07830
03430 Mismatch repair
G5S47_07830
03440 Homologous recombination
G5S47_07830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stuc03032
]
G5S47_07830
03400 DNA repair and recombination proteins [BR:
stuc03400
]
G5S47_07830
Enzymes [BR:
stuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G5S47_07830
DNA replication proteins [BR:
stuc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G5S47_07830
DNA repair and recombination proteins [BR:
stuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G5S47_07830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QYB16761
LinkDB
All DBs
Position
complement(1788796..1789413)
Genome browser
AA seq
205 aa
AA seq
DB search
MGVLTLSEQRIRSRRPFNAKYIPNLHFLTQPSFVAVDFETANRGGGVSACQVALVKMEDG
QVTDEFSTFIQPPQGYSRFEFTWLHGIGPRQVATAPMWDQIADQIARFVGDLPVYAHNAT
FDARVWKDLDDYFGTLSLPQHFFCSYLTARRMLPGLENYALPTVLHECDPTFSLNHHEAG
SDAHACARIVRHLASRDDLHGALAP
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgctgacactgagtgaacagagaatacggtcgcgccggccttttaatgcgaaa
tacattcccaacctgcacttcttgacgcaaccgtcttttgttgccgtcgatttcgaaact
gctaatcgcggtggcggagtctccgcctgccaggtggcattggtgaaaatggaagacggg
caggtgactgacgaattctcgaccttcattcagcccccgcagggttatagccggttcgaa
ttcacatggcttcacggaatcggcccgcgtcaagtagcgacggctccaatgtgggatcag
atcgctgaccagatcgcacgcttcgttggcgatctccccgtctacgctcataacgcgacg
ttcgacgctcgagtctggaaagacttggacgactactttgggacactttctttgccccag
cattttttctgctcgtatttgacggcacgacgaatgcttccgggcctcgaaaattacgcg
ttgccgactgttcttcacgaatgtgacccgacctttagtctgaatcaccacgaagcgggt
tccgatgctcacgcttgtgcgcgaatcgtcaggcaccttgcgtcccgcgatgatctgcac
ggcgctcttgccccctga
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