Streptomyces tubercidicus: STRTU_000481
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Entry
STRTU_000481 CDS
T09099
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
stud
Streptomyces tubercidicus
Pathway
stud03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
STRTU_000481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stud03400
]
STRTU_000481
DNA repair and recombination proteins [BR:
stud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
STRTU_000481
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
WAU10401
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All DBs
Position
527101..528243
Genome browser
AA seq
380 aa
AA seq
DB search
MRSIWNGSISFGLVTIPVKTYSATDRTSSVSFVRIHEKDGAQIQYRKICELDGEEVPNEE
VGKGYQAPGDDTIVPITDDDLSRLPMPTAKTLSILSFTDPDQIDPLQMDKAYYLGPNGAA
AAKPYALLREALEDHRKVAIGKVAMRGRESLAMLRAHDGALVMHTLLWPDQVRPVTGVAP
EDVELRENELTLAETLMDSLGELDPAELHDDYREAVEELVTAKLEGEPVAPAASGTSGAQ
VIDLTAALEKSVRAARGRETGAESESGSESASVTPIRGRKTAKKATGKKTATAATATAKK
APAKKSAAAAPKTTGGRAKGTSAAQKATAAGTSKTTPKKATSQKTTSKTAAKKTTAKTAT
PKKTAAKKTAAKKTSKKSSA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctatatggaatgggtccatatcattcggtctggtcaccatccccgtgaagacc
tacagcgccaccgaccgcacctcgtcggtgtccttcgtgcgcattcacgagaaggacggc
gcgcagatccagtaccggaagatctgtgagctggacggcgaggaagtcccgaacgaggag
gtcggcaagggctatcaggcgccgggcgacgacaccatcgtgccgatcaccgacgacgat
ctgtcccggctgccgatgcccaccgccaagacgctgtcgatcctctcgttcaccgacccc
gaccagatcgacccgctccagatggacaaggcgtactacctggggcccaacggggcggcc
gccgccaagccgtacgccctgctgcgggaggcgctggaggaccaccgcaaggtcgcgatc
ggcaaggtggcgatgcgggggcgggagtcactggcgatgctgcgggcgcacgacggggcg
ctcgtgatgcatacgctgctgtggccggatcaggtccggccggtcaccggtgtggcgccc
gaggacgtcgagctccgcgagaacgagctgacgctggccgagaccctgatggactccctg
ggcgagctggaccccgccgaactccacgacgactaccgcgaggccgtggaggagctggtc
accgccaagctggagggcgagccggtcgccccggccgcgtcgggcacctcgggcgcccag
gtcatcgatctcacggcggcgctggagaagagcgtacgggcggcacggggccgggagacc
ggtgcggagtcggaatcggggtcggaatcggcatccgtgacacccatacgggggcggaag
acggcgaagaaggccacggggaagaagaccgccacggccgccacggccaccgcgaagaag
gctcccgcgaagaagtcggcggccgccgccccgaagaccaccggcgggcgagccaagggc
acttcggcggcccagaaggccacagccgccggtacttccaagaccacgccgaagaaagcc
acgtcgcagaagaccacgtcgaagaccgccgccaagaagacgacggccaagacggccacg
cccaagaagaccgcggccaagaagaccgcggccaagaagacgagcaagaagtcgtccgcg
tag
DBGET
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