KEGG   Streptomyces tubercidicus: STRTU_000481
Entry
STRTU_000481      CDS       T09099                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
stud  Streptomyces tubercidicus
Pathway
stud03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:stud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    STRTU_000481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stud03400]
    STRTU_000481
DNA repair and recombination proteins [BR:stud03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     STRTU_000481
SSDB
Motif
Pfam: Ku HC2
Other DBs
NCBI-ProteinID: WAU10401
LinkDB
Position
527101..528243
AA seq 380 aa
MRSIWNGSISFGLVTIPVKTYSATDRTSSVSFVRIHEKDGAQIQYRKICELDGEEVPNEE
VGKGYQAPGDDTIVPITDDDLSRLPMPTAKTLSILSFTDPDQIDPLQMDKAYYLGPNGAA
AAKPYALLREALEDHRKVAIGKVAMRGRESLAMLRAHDGALVMHTLLWPDQVRPVTGVAP
EDVELRENELTLAETLMDSLGELDPAELHDDYREAVEELVTAKLEGEPVAPAASGTSGAQ
VIDLTAALEKSVRAARGRETGAESESGSESASVTPIRGRKTAKKATGKKTATAATATAKK
APAKKSAAAAPKTTGGRAKGTSAAQKATAAGTSKTTPKKATSQKTTSKTAAKKTTAKTAT
PKKTAAKKTAAKKTSKKSSA
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgcgttctatatggaatgggtccatatcattcggtctggtcaccatccccgtgaagacc
tacagcgccaccgaccgcacctcgtcggtgtccttcgtgcgcattcacgagaaggacggc
gcgcagatccagtaccggaagatctgtgagctggacggcgaggaagtcccgaacgaggag
gtcggcaagggctatcaggcgccgggcgacgacaccatcgtgccgatcaccgacgacgat
ctgtcccggctgccgatgcccaccgccaagacgctgtcgatcctctcgttcaccgacccc
gaccagatcgacccgctccagatggacaaggcgtactacctggggcccaacggggcggcc
gccgccaagccgtacgccctgctgcgggaggcgctggaggaccaccgcaaggtcgcgatc
ggcaaggtggcgatgcgggggcgggagtcactggcgatgctgcgggcgcacgacggggcg
ctcgtgatgcatacgctgctgtggccggatcaggtccggccggtcaccggtgtggcgccc
gaggacgtcgagctccgcgagaacgagctgacgctggccgagaccctgatggactccctg
ggcgagctggaccccgccgaactccacgacgactaccgcgaggccgtggaggagctggtc
accgccaagctggagggcgagccggtcgccccggccgcgtcgggcacctcgggcgcccag
gtcatcgatctcacggcggcgctggagaagagcgtacgggcggcacggggccgggagacc
ggtgcggagtcggaatcggggtcggaatcggcatccgtgacacccatacgggggcggaag
acggcgaagaaggccacggggaagaagaccgccacggccgccacggccaccgcgaagaag
gctcccgcgaagaagtcggcggccgccgccccgaagaccaccggcgggcgagccaagggc
acttcggcggcccagaaggccacagccgccggtacttccaagaccacgccgaagaaagcc
acgtcgcagaagaccacgtcgaagaccgccgccaagaagacgacggccaagacggccacg
cccaagaagaccgcggccaagaagaccgcggccaagaagacgagcaagaagtcgtccgcg
tag

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