Streptomyces tubercidicus: STRTU_000953
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Entry
STRTU_000953 CDS
T09099
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud03030
DNA replication
stud03430
Mismatch repair
stud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STRTU_000953
03430 Mismatch repair
STRTU_000953
03440 Homologous recombination
STRTU_000953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stud03032
]
STRTU_000953
03400 DNA repair and recombination proteins [BR:
stud03400
]
STRTU_000953
Enzymes [BR:
stud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STRTU_000953
DNA replication proteins [BR:
stud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STRTU_000953
DNA repair and recombination proteins [BR:
stud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STRTU_000953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Matrix_Filo
Motif
Other DBs
NCBI-ProteinID:
WAU10827
LinkDB
All DBs
Position
1133783..1134391
Genome browser
AA seq
202 aa
AA seq
DB search
MSPLTWPESLFVVDVEGNGANPPDLVEVAAIPMQAGMPQPDGARSWLIRPPEPIAGRISR
IHGITNDMVADAPLWDEVAGDVADVLKNAWICAHSASVEYRVLTRHMPTWQPAGVIDTLR
LARATFPGHKAFGLDALITHTRISLDDVAGTRHRAAYDAHATGLLLHHLASHYDMWEAMV
VKAVPPGMPGLPEPEPEEDTLW
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgctgacttggcctgagtccctgttcgtcgtcgatgtcgaggggaacggggcc
aacccgccggacttggtcgaggtggcggcgattcccatgcaggccgggatgccgcagccc
gacggggcccggtcgtggctgatccggccccctgaaccgatcgcaggccgcatcagccgc
attcacggcatcaccaatgacatggtggccgatgctcccctgtgggacgaggtcgccggg
gatgtcgctgatgtgcttaagaatgcgtggatctgcgcacactccgccagtgtcgaatac
agggtcctgacccggcacatgcccacctggcagcccgcaggggtgatcgacaccctacgg
ctcgcccgtgccacgttccccggtcacaaggccttcggcctggacgccctcattacccac
acccgcatcagcctggacgacgtggccggcactcgtcatcgcgccgcctacgacgcgcac
gcaaccgggctgctgttgcaccacctcgcctcccactacgacatgtgggaggccatggtc
gtcaaggcagtaccgccgggcatgcccggcctgcccgaacccgaacccgaggaggacaca
ctgtggtag
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