Streptomyces tubercidicus: STRTU_001112
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Entry
STRTU_001112 CDS
T09099
Name
(GenBank) exo-alpha-sialidase
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud00511
Other glycan degradation
stud00600
Sphingolipid metabolism
stud01100
Metabolic pathways
stud04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
STRTU_001112
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
STRTU_001112
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
STRTU_001112
Enzymes [BR:
stud01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
STRTU_001112
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
Laminin_G_3
BNR
BNR_3
Tli3
Laminin_G_2
Laminin_G_1
DUF4185
Motif
Other DBs
NCBI-ProteinID:
WAU10963
LinkDB
All DBs
Position
1310081..1312078
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AA seq
665 aa
AA seq
DB search
MTSVLRAHPSPRRRPRHRPAALLAALTATALAVLPTAPAQAAPGAPAAPAAPVGGFEQQI
LFKASQDPGYYCFRIPAVVQSTRGTLLAFAEGRRHDCGDAGDIDLVLKRSTDGGRTWGPL
QVINHGNGDTHGNPAPIVDRRTGRIVLAETYNKGRADGLSCDVPCDRTPHLQYSDDDGAS
WSAPRDLTADIRPPQWNSWYATGPVHGIQLTRGRHAGRLLFSMNAESYAAGRVTGNHAAL
IHSDNGGATWKVGALDSWPVAAGSASEGPSKSGGGTEWSGTFRQKPSEMTLLERSDGSVY
VNGREQDGTDLGHRTAAVSRDGGNSFVAPFRALPDLYTPMVQGSALRLPGSRTGRTLFAA
PADPDRRRTMTIRSSYDEGRTWEGVDRGARVTTDWSGYSDLVAISREVTGLMYEGGAVDA
RDEIRFARFTEDWLGPRRAPDPTTPDTAPGARPALVLGGARGTDGRFGQALSFDGTDDAV
RLPFRRSLPLGTNDFTCSLWFRYAATTGEQPLLWMGGVGAKAPQVAVSGDPAHHRIVARL
TAVDGAQPAAVAQAVTNDAYNDGSWHHLALRRSGGRLLLTVDGGETTVTPDVPGSVSRGS
VFGVHLGQKPDGRVQFTGALDEVRVYRRALTDTELSRVRADNARVDGPLVLGLPLDRVRG
GSAKG
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagttctccgcgcacaccccagcccccgccgcagaccccgccaccgccccgcg
gccctgctcgccgcactgaccgcgacagccctcgccgtcctgccgaccgccccggcgcag
gccgcgccgggcgctcccgccgccccggccgcccccgtcggcggattcgagcagcagatc
ctcttcaaggcgtcccaggacccgggctactactgcttccgtataccggccgtcgtgcag
tccacacgcggcaccctgctcgccttcgccgagggccgccgccacgactgcggcgacgcg
ggcgatatcgacctcgtcctcaagcgctccaccgacggcggccgaacctgggggccgctc
caggtcatcaaccacggcaacggcgacacccacggcaacccggctcccatcgtggaccgc
cgcaccggccggatcgtgctcgcggagacatacaacaagggccgtgccgacggcctcagt
tgtgatgtcccctgtgatcgcaccccgcacctccagtacagcgacgatgacggcgcgagc
tggtccgcgccccgggacctgaccgccgacatccgcccgccgcagtggaattcctggtat
gccaccgggcccgtacacggcatccagctcacccgcggacggcacgcgggccggctgctg
ttcagcatgaacgccgagagctacgcggcgggccgggtcaccggcaaccacgccgccctg
atccacagcgacaacggcggcgccacctggaaggtcggcgcgctggacagctggcccgtc
gcggcaggctccgcttccgaaggtccgtcaaagagcggaggcggaacggagtggagcggc
acattccgtcagaagccctcggagatgaccctcctggagcgctccgacggctcggtctac
gtcaacggccgcgaacaggacggcaccgacctgggccatcgcaccgccgcggtcagccgc
gacggcgggaactccttcgtcgcaccgttccgcgccctccccgacctctacaccccgatg
gtgcagggctcggcgctgcggctgccgggctcgcgcaccggccgcaccctgttcgcggcg
cccgccgaccccgaccggcgccggaccatgaccatccgctcctcctatgacgagggccgc
acctgggagggtgtcgaccgcggcgcccgggtcaccaccgactggtccggctactccgat
ctggtcgccatctcccgcgaggtcaccggcctgatgtacgagggcggtgcggtcgacgcc
cgggacgagatccgcttcgcccgcttcaccgaggactggctgggcccacggcgcgccccg
gaccccaccacccccgacaccgccccgggcgcccggcctgcgctcgtcctgggcggcgcc
cgcggcaccgacggccgcttcgggcaggcgctgtccttcgacggcaccgatgacgcggta
cgcctccccttccgccgctccctcccgctgggcaccaacgacttcacctgcagcctgtgg
ttccgctatgccgccaccaccggcgaacagccgctgctgtggatgggcggtgtgggcgcc
aaggccccccaggtcgccgtctcgggcgaccccgctcaccaccggatcgtcgcccgtctc
accgccgtcgacggcgcccagccggccgccgtcgcccaggcggtgaccaacgacgcctac
aacgacggcagttggcaccatctggcactgcgccgtagtggcggacggctgctgctcacg
gtggacgggggcgagaccaccgtcacccccgatgtcccgggatcggtcagccgtggctcg
gtcttcggcgtacacctcggccagaagccggacggccgcgtccagttcaccggcgcgctg
gacgaggtacgcgtctaccggcgggcgctgaccgacaccgaactgtcccgcgtacgcgcc
gacaatgcccgggtggacggcccgctggtgctggggctgccgctggaccgggtgcgtggg
ggcagcgcgaagggctga
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