Streptomyces tubercidicus: STRTU_001662
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Entry
STRTU_001662 CDS
T09099
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
stud
Streptomyces tubercidicus
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stud03021
]
STRTU_001662
Transcription machinery [BR:
stud03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STRTU_001662
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
HTH_Crp_2
Sigma70_r4_2
MarR_2
HTH_23
HTH_31
HTH_3
HTH_27
MarR
HTH_10
DUF7343
IF2_N
KORA
HTH_37
Motif
Other DBs
NCBI-ProteinID:
WAU11450
LinkDB
All DBs
Position
complement(1940985..1941878)
Genome browser
AA seq
297 aa
AA seq
DB search
MNTVFEDVCDTQLPGPHDGPSPQAGRYSTTLPRIEDAGSVAPYDAKALSPLFFERLAELD
EGTPEYQYARNTLVEMNLSLVRYVASRYSSHRDQMEDIVQVGTIGLIKAIDRFDLSRRTE
FSAFAIPHILGEIKRFFRDTSWAVHVPRRLQELRIDLAQAMEQLSTLLDREPTVKELAEH
LQLTEEEIIEGIVAGNGHTAVSLHLSGDSEATPGGGPAFADLLGTTDPATEHVEDRYALA
SLLQQLGERDRLIVHLRFDREMTQAQIGAALGISQMHVSRLLARIIKQLREGMLGLK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggttttcgaggacgtatgtgacacacaactgccggggccccatgacgggccg
tcaccgcaggccggaagatattccaccacgcttccgcgcatcgaggacgccgggagtgtg
gcgccctatgacgccaaggcgctgtcgccgctgttcttcgagcggctcgcggaactcgac
gagggaactcccgagtatcagtacgcccgcaatacgctcgtcgagatgaacttgtcgctg
gtgcgctatgtggcctcccggtacagcagccaccgtgaccaaatggaggacatcgtccag
gtcggtaccatcggcctcatcaaggccatcgaccggttcgacctctcccgccgaacggag
ttttcggccttcgccattccccatatcctcggggagatcaagcggttcttccgcgacacc
agctgggccgttcatgtcccgcgccggctccaggaactccgtatcgacctggctcaggcc
atggagcagctgtccaccctcctggaccgcgaacccaccgtcaaagagctggccgagcat
ttgcagctcacggaagaggagatcatcgagggaattgtggccggtaatggccacacggcc
gtctccctgcacctctccggtgacagtgaggcgacaccgggcggcggtcccgccttcgcc
gaccttctcggcacgaccgaccccgccacggagcacgtcgaagaccgctacgcgctggcc
tcgctgctgcaacagctcggtgagcgcgaccggctcatcgtccatctgcgcttcgaccgg
gagatgacacaggcccagatcggcgcggcgctcggcatctcccagatgcatgtctcccga
ctgctcgcccgcatcatcaagcagctgcgcgagggcatgctcggcctgaagtga
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