Streptomyces tubercidicus: STRTU_001774
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Entry
STRTU_001774 CDS
T09099
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud00300
Lysine biosynthesis
stud00470
D-Amino acid metabolism
stud01100
Metabolic pathways
stud01110
Biosynthesis of secondary metabolites
stud01120
Microbial metabolism in diverse environments
stud01230
Biosynthesis of amino acids
Module
stud_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STRTU_001774 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STRTU_001774 (dapF)
Enzymes [BR:
stud01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
STRTU_001774 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
WAU11546
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All DBs
Position
complement(2103321..2104196)
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AA seq
291 aa
AA seq
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MTSTQRLAFLKGHGTENDFVIVPDPDGRLDLSATAVARICDRRAGLGGDGLLRVVRSAAH
PEARDLADEAEWFMDYRNGDGSIAEMCGNGVRVFARYLLHAGLVEAGDLAIATRAGVRRV
HLAKTGDVTVSMGRAELPAEGVVVTLGGRSWPARNVNMGNPHAVAFVEDLAHAGDLLAVP
PFSPASVYPDGVNVEFVVDRGPRHVAMRVHERGSGETRSCGTGACAVAVATARRDGLDPA
ETGTPATYRVDVLGGSLSITERPDGTVEMTGPAEIVAEGTFDAAWLAAALA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagcacgcagcgcctcgccttcctcaagggccacggcaccgagaacgactttgtg
atcgtccccgacccggacggccggctcgatctgtccgcgaccgccgtcgccaggatctgc
gaccggcgggccggtctcggcggcgacggcctgctgcgcgtcgtacgctccgccgcgcac
cccgaggcgcgcgacctggccgacgaggccgagtggttcatggactaccgcaacggcgac
ggctcgatcgccgagatgtgcggcaacggcgtccgcgtcttcgcccgctatctgctgcac
gccggtctggtcgaggccggtgacctcgcgatcgccacccgcgccggcgtacgccgtgtg
cacctcgccaagaccggcgatgtcacggtctccatgggccgggccgaactccccgcggag
ggcgtcgtcgtcaccctcggcggccgcagctggccggcccgcaacgtgaacatgggcaat
ccgcacgcggtcgcctttgtcgaggatctggcccacgccggtgacctgctggccgtaccg
ccgttcagcccagcgtcggtttatcccgacggcgtgaacgtcgagttcgtcgtcgaccgc
gggccgcgccatgtggcgatgcgggtgcacgaacgcggctcgggcgagacccgctcctgc
ggcaccggcgcctgcgcggtcgccgtcgccaccgcccgccgggacggtctggaccccgcg
gagaccggtacgcccgccacataccgggtcgatgtgctcggcggcagcctctcgatcacc
gagcgccccgacggcacggtcgagatgaccggcccggccgagatcgtcgccgagggcacc
ttcgacgccgcctggctggccgccgcgctcgcctga
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