Streptomyces tubercidicus: STRTU_001808
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Entry
STRTU_001808 CDS
T09099
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
stud
Streptomyces tubercidicus
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stud03009
]
STRTU_001808 (rimO)
Enzymes [BR:
stud01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
STRTU_001808 (rimO)
Ribosome biogenesis [BR:
stud03009
]
Prokaryotic type
ribosomal protein modification factors
STRTU_001808 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WAU11576
LinkDB
All DBs
Position
complement(2137007..2138533)
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AA seq
508 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEEAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKAAAREGGGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYSDISGR
LQTILSGGIHASHTPRDRRKLLPISPAERQDAASVALPGHAQSGPGEATPPADPPADLPE
GVAPASGPRAPLRRRLGSSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRW
LAGEGVKEVMLVSENNTSYGKDLGDIRLLETLLPELAAVDGIERIRVSYLQPAEMRPGLI
DVLTGTDKVAPYFDLSFQHSAPGVLRSMRRFGGTDSFLELLETIRTKAPQAGARSNFIVG
FPGETESDLAELERFLTEARLDAIGVFGYSDEDGTEAASYEDKVDPDVVAERLARVSRLA
EELTAQRAEERIGETLRVLVDRTDDEDGVVGRAAHQAPETDGVTLLSTDQELAPGRMVEA
KVVASEGVDLVAEVLSVEGTGCTEEAAR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcctggcagcggacggctgggagctcgtcgaggaagccgcc
gatgccgatgtcgccgtcgtcaatacctgtggtttcgtcgaggccgccaagaaggactcc
gttgatgccctgctggaagccaacgatctgaaggccgccgcccgggaggggggcggcaga
acccaggccgtggtggccgtcggctgtatggccgagcgctacggcaaggagctcgccgag
gcgctgcccgaggcggacggggtgctcggcttcgacgactacagcgatatctccggccgc
ctgcagaccatcctgagcggcggcatccacgcctcccacaccccgcgcgaccgccgcaag
ctgctgccgatcagcccggccgagcgccaggacgcagcctcggtcgcgctgcccggccac
gcccagagcggtcccggcgaggcgacgccgccggcggatccgcccgcggacctgccggag
ggcgtcgcgccggcctccgggccgcgtgcgccgctgcgccgccggctcggcagcagcccg
gtggcctcggtgaagctggcctccggctgcgaccggcgctgctcgttctgcgccatcccg
tccttccgtggctccttcatctcccgccggccctccgatgtgctgggggagacccgctgg
ctggccggggagggcgtcaaggaggtcatgctggtctccgagaacaacacctcctacggc
aaggacctcggcgacatccgcctcctggagacgctgctgccggagctggcggccgtcgac
ggcatcgagcggatccgggtcagctacctccagcccgccgagatgcgccccggcctgatc
gacgtgctgaccggcaccgacaaggtggcgccctacttcgatctgtccttccagcactcg
gcgcccggtgtgctgcgctccatgcggcgcttcggcggcaccgacagcttcctggagctg
ctggagacgatccgcaccaaggcaccgcaggccggcgcccgctccaacttcatcgtcggc
ttccccggcgagaccgagagcgatctggcggagctggagcgcttcctcaccgaggcccgg
ctcgatgccatcggcgtcttcggatactccgacgaggacggcaccgaggccgcctcctac
gaggacaaggtcgacccggacgtggtcgccgagcggctggcgcgggtctcgcggctggcc
gaggagctgaccgcgcagcgtgccgaggagcggatcggcgagacgctgcgggtgctggtc
gaccggaccgacgacgaggacggtgtcgtcgggcgggccgcgcaccaggctccggagacc
gatggcgtcaccctgctgtcgacggaccaggagctggcgcccggtcgtatggtcgaggca
aaggtggtggcgagcgagggcgtggacctcgtcgcggaggtgctgtcggtggagggcacg
gggtgtaccgaggaggcggccagatga
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