Streptomyces tubercidicus: STRTU_001812
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Entry
STRTU_001812 CDS
T09099
Name
(GenBank) HAMP domain-containing protein
Organism
stud
Streptomyces tubercidicus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
GLE1
ATG14
Motif
Other DBs
NCBI-ProteinID:
WAU11580
LinkDB
All DBs
Position
complement(2143458..2148980)
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AA seq
1840 aa
AA seq
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MESGAAARGASTRAKGGRSRNNGTTEVDTAALNRLLVALVAMRDGNFRKRLTVSGDGVMS
EIAAVFNEVADRNLHLTGELTRVRRVVGREGKLTERLEVGAAEGSWAAAIDASNALVDDL
VRPVSEVGRVLSAVSEGDLEQRMDLRSRSSDSSSEHPLRGEFLKVGRTVNGLVDQLSAFT
DEVTRVASEVGTEGKLGGQARVRGMSGSWKDLTESVNTMASRLTAQVRDIALVTTAVAKG
DLSRKVTVHVSGEMLELKNTVNTMVDQLSSFASEVTRVAREVGTEGELGGQAQVPGVAGV
WKDLTDSVNLMAGNLTAQVRGIAQVTTAVANGDLSQKVTVSARGEVAQLADTINTMTETL
RTFADEVTRVANEVGAEGQLGGQAQVPGAAGTWKDLTDSVNTAFRNLTAQVRDIAQVTTA
VANGDLSQTVTVDVAGEMLELKNTVNTMVGQLSSFGAEVTRVAREIGVEGELGGQAAVPG
AAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKNTVNTM
VDQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGTWKELTDSVNFMAGNLTSQVRQIAQ
VTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSAFAEQVTRVAREVGTDGRLGGQA
QVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDLSQKIDVDARGEILELKNT
LNTMVDQLSSFAEQVTRVAREVGTEGILGGQAEVQGVSGTWKDLTQSVNFMANNLTSQVR
NIAEVTTAVARGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRVAREVGTEGQL
GGQARVPGATGIWLDLSDNVNLMANNLTIQVRNISQVSAAVANGDLTKKVTVEARGEVAQ
LADTVNTMVTTLSSFADEVTRVAREVGTDGILGGQARVPGVAGTWKDLTESVNSMANNLT
GQVRNIAMVTTAIAKGDLTKKIDIDARGEILALKTTINTMVDQLSSFAEQVTRVAREVGT
EGQLGGQAQVRGVAGTWRDLTESVNEMAGNLTRQVRAIAAVAAAVTLGDHNVRIDVDAAG
EILELQDNVNTMISTLRETTLANEEQDWLKGNLARISGLMQGRRDLKDVATLIMSELSPA
VSAQHGAFFLAAQPDSQEIGADGGEAGAYELRLMGSYGYAMGGMPTTFRPGETLIGTAAE
EGRTILVENVPSGYLKIASGLGEAPPANVIVLPVLFEDKVLGVIELASFQPFTQIQKDFL
SQIAEMIATSVNTISVNTKTEVLLKQSQELTEQLKERSGELESRQKALELSNSELEEKAE
QLRAQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLILAK
LLADNAEGNLSPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQLVD
YVEATFRPLTAEKGLDFSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDSGAVELVI
RPAGADVPVAIREQLLEHGSLRDPDADMIAFSVTDTGIGIASSKMRVIFEAFKQADGTTS
RKYGGTGLGLSISREIARLLGGEIHAASEPSRGSTFTLYLPHNPGGLPPQGYPQLVAGGI
AMDAEARESEVGQQQAEEQQEYEQGSGGSLNRRRRRALQGTPRRFELSGRQPSAPPQPAP
EPPLPQAPQPVPQPPAEEPWLGNGQDLVDPAFEGGFHGEKVLIVDDDIRNVFALTSVLEQ
HGLSVLYAENGREGIEVLEQHDDIVLVLMDIMMPEMDGYATTAAIRRMPQFAGLPIIALT
AKAMKGDREKSIDSGASDYVTKPVDTDHLLSVMEQWMRAE
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcggcgcggggcgcaagcacgcgcgcgaaaggcggacgatcccgg
aacaacgggacgaccgaggtggatacggctgcgctgaatcggctgttggtcgcgttggtg
gccatgcgggacgggaacttccgcaaacggctcacggtttccggcgacggcgtcatgtcg
gagatcgcggcggtcttcaacgaggtcgcggaccgcaatctgcatctcacgggcgagctg
acgcgggtgcgccgggtcgtcggccgtgagggaaagctcacggaacggctggaggtcggc
gccgccgagggctcctgggccgcggcgatcgacgcctcgaatgccctggtcgatgacctc
gtacggcccgtctccgaggtgggacgggtgctgtcggcggtctccgagggcgacctggaa
cagcggatggacctgcgctcgcgcagttcggacagctcttcggagcaccccctgcggggt
gaattcctgaaggtcggccggaccgtcaacgggctggtggatcagctctccgcctttacc
gacgaggtcacgagagtggccagtgaggtcggtacggagggcaagctcggcggccaggcc
cgggtgcgtggaatgtcgggttcgtggaaggacctcacggaatccgtcaacaccatggcg
tcccggctgacggcgcaggtccgtgacattgctctcgtcaccaccgcggtggccaagggt
gatctgtcgcgcaaggtgaccgtccatgtctccggcgagatgctggagctgaagaacacc
gtcaacacgatggtggaccagctctcctcgttcgcctccgaggtgacgcgggtcgcccgg
gaggtcggcacggagggtgaactcggcggtcaggcgcaggtccccggtgtcgccggcgtg
tggaaggacctgacggattcggtcaatctcatggccggcaacctcaccgcgcaggtgcgc
gggatcgcgcaggtcaccacggctgtggcgaacggcgatctgtcgcagaaggtcacggtc
agcgcacgcggcgaggtcgcgcagctggccgacacgatcaacaccatgaccgagacgctg
cggaccttcgcggacgaagtgacgcgagtggcgaacgaggtcggggccgagggccagctc
ggcggtcaggcgcaggtgcccggcgcggccggcacgtggaaggacctcaccgattcggtg
aacaccgccttccgcaacctgacggcgcaggtgcgggacatcgcgcaggtgacgacggcg
gtcgccaacggtgatctctcgcagacggtcaccgtcgatgtcgccggtgaaatgctggag
ttgaagaacaccgtcaacacgatggtgggtcagctgtcgtcgttcggtgccgaagtgacg
cgcgtggcgcgggagatcggcgtcgagggcgagctgggcggtcaggcggcggtgcccggc
gcggccgggacgtggaaggacctcacggactccgtgaacaccgccttccgcaacctcacc
gggcaggtgcgcaacatcgcccaggtgacgaccgcggtggccaacggtgacctctcgcag
aaggtcaccgtcgatgtctccggcgagatgctccagctgaagaacaccgtgaacaccatg
gtggatcagctgtcctcgttcgccgaccaggtcacgcggatggccagggacgtgggcacg
gagggccggctgggcggccaggcccgggtggacggcgtcagcggcacctggaaggaactg
accgactccgtcaacttcatggcggggaacctgacttcacaggtgcggcagatcgcccag
gtgacgacggcggtcgcccggggtgacctctcccagaagatcgacgtggacgcgcgcggc
gagatcctggagctgaagaacaccatcaacacgatggtcgatcagctctccgcctttgcc
gagcaggtgacccgggtcgcccgggaggtcggtacggacggcaggctgggcggccaggcg
caggtgccgggcgtcgcgggtgtctggcgcgatctgaccgactcggtgaacggcatggcc
gggaacctgacggcccaggtccgcaatatcgcgcaggtcgccacggcggtcgcgcgcggt
gacctgtcgcagaagatcgacgtggacgccaggggcgagatcctggagctgaagaacacc
ctgaacaccatggtggaccagctctcctcgttcgcggagcaggtcacccgggtcgcccgc
gaggtgggcaccgagggcatcctgggcggccaggccgaggtgcagggcgtcagcggtacc
tggaaggacctcacccagtccgtcaacttcatggcgaacaacctcacctcgcaggtgcgc
aacatcgccgaggtgacgaccgcggtggcccgcggtgatctgtccaagaagatcaccgtc
gatgccaagggcgagatcctcgaactggtcacgaccgtcaacacgatggtcgaccagctg
tcctcgttcgccgagcaggtgacccgggtggcccgcgaggtgggcaccgagggccagttg
ggcggtcaggcgcgggtgccgggtgccaccggcatctggctggacctcagcgacaacgtg
aacctgatggccaacaacctgaccatccaggtgcgcaacatctcccaggtctcggcggcg
gtcgccaacggagacctgacgaagaaggtcacggtcgaggcgcgcggcgaagtggcgcag
ctcgccgacacggtcaacacgatggtcacgacgctgtcgtcgttcgcagacgaggtcacc
cgggtggcccgtgaggtgggcaccgacggcatcctgggcggtcaggcccgcgtccccggc
gtcgccggtacgtggaaggacctcaccgagtccgtgaactcgatggccaacaacctgacc
ggccaggtccgcaacatcgccatggtcaccaccgccatcgccaagggcgatctgaccaag
aagatcgacatcgatgcgcggggcgagatcctcgcactgaagaccaccatcaacaccatg
gtcgaccagctgtcgtcgttcgcggagcaggtcaccagagtggcccgcgaggtgggcacg
gaaggccagctgggcgggcaggcacaggtgcgcggtgtggccggcacctggcgggacctg
accgaatcggtgaacgagatggcgggcaacctgacccgtcaggtgcgggccatcgccgcg
gtcgccgcggcggtcaccctcggcgatcacaacgtccgtatcgatgtggacgcggccggc
gagatcctggaactccaggacaacgtcaacaccatgatctccacgctccgggagaccacc
ctcgccaacgaggaacaggactggctcaagggcaatctggcccggatctccggtctcatg
cagggccgacgcgacctcaaggacgtcgccacgctcatcatgagcgagctgtcacccgcg
gtctccgcccagcacggcgcgttcttcctcgccgcgcagcccgacagccaggagatcggc
gcggacggcggcgaggcgggcgcctacgagctgcggctgatgggctcgtacggctacgcc
atgggcgggatgccgacgaccttccggccgggcgagacgctcatcggtacggccgcggag
gaggggcgcacgatcctggtggagaacgtcccctccggctatctcaagatcgcttccggg
ctgggcgaggcgccgccggcgaatgtgatcgtgctgccggtgctgttcgaggacaaggtg
ctcggcgtgatcgagctggcgtccttccagccgttcacccagatccagaaggacttcctc
agccagatcgccgagatgatcgcgaccagcgtcaacaccatctcggtgaacaccaagacc
gaggtgctgctcaagcagtcgcaggagctgaccgagcagctcaaggagcgctcgggcgag
ctggagagccggcagaaggcgctggagctgtccaactccgagctggaggagaaggccgag
caactgcgtgcgcagaaccgcgacatcgaggtgaagaacaccgagatcgaggaggcgcgg
caggtcctggaggagcgcgccgagcagctcgcggtctcgatgcgctacaagtcggagttc
ctggcgaacatgtcgcacgagctgcgtacgccgctcaactccctgctgattctggccaaa
ttgctggccgataatgcagaggggaacctctccccgaagcaggtcgaattcgccgaaacc
atccatggcgccggcagcgacctgctccagctgatcaacgacattctcgacctgtccaag
gtcgaggccggcaagatggacgtcagcccgacccggatcgcgctggtccagctcgtcgac
tatgtggaggccaccttccggccgctgaccgcggagaagggactcgacttctccgtacgg
gtctccccggagctgccggcgacgctgcacaccgacgaacagcggctgctgcaggtgctg
cgcaatctgctgtccaacgcggtgaagttcaccgacagcggcgccgtcgagctggtgatc
cggccggccggtgcggatgtcccggtggccatccgggagcagctgctggagcacggttca
ctgcgcgacccggacgcggacatgatcgccttctcggtcaccgacaccggtatcggcatc
gcctccagcaagatgcgggtcatcttcgaggcgttcaagcaggcggacggcacgaccagc
cgcaagtacggcggtacgggcctgggcctgtccatcagccgggagatcgcccggctgctg
ggcggcgagatccacgccgcgagcgagccgagccgcggctccacgttcacgctctacctg
ccgcacaaccccggcgggctgccgccgcagggctacccgcagctggtggccggcgggatc
gcgatggacgcggaggcccgcgagagcgaggtcgggcagcagcaggccgaggagcagcag
gagtacgagcagggctccggaggcagcctcaaccggcgccgccggcgggcgcttcagggg
accccgcggcgcttcgagctctccgggcggcagccgtccgcaccgccgcagccggcaccg
gagccgccgctgccgcaggccccgcagccggttccccagccgcccgcggaggagccctgg
ctcggcaacggccaggatctggtggacccggccttcgagggcggtttccatggtgagaag
gtactgatcgtcgatgacgacatccgcaatgtcttcgcactcaccagcgtcctggaacaa
cacgggctgtcggtgctctacgcggagaacgggcgcgagggcatcgaggtcctggagcag
cacgacgacatcgtgctggtcctgatggacatcatgatgccggagatggacggctatgcg
accacggcggcgatccgccggatgccgcagttcgccggactgcccatcatcgcgctgacc
gcgaaggcgatgaagggtgaccgggagaagagcatcgactccggggcctccgactacgtg
accaagccggtggataccgatcatctgttgtcggtcatggagcaatggatgcgggcggag
tga
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