Streptomyces tubercidicus: STRTU_001944
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Entry
STRTU_001944 CDS
T09099
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud02024
Quorum sensing
stud03060
Protein export
stud03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
STRTU_001944 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
STRTU_001944 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STRTU_001944 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
stud02044
]
STRTU_001944 (ffh)
Enzymes [BR:
stud01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
STRTU_001944 (ffh)
Secretion system [BR:
stud02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
STRTU_001944 (ffh)
Eukaryotic Sec-SRP protein
STRTU_001944 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
AAA_22
Zeta_toxin
nSTAND3
APS_kinase
MMR_HSR1
AAA_18
6PF2K
AAA_16
AAA_33
Thymidylate_kin
TsaE
NPHP3_N
AAA_24
Motif
Other DBs
NCBI-ProteinID:
WAU11701
LinkDB
All DBs
Position
complement(2304616..2306166)
Genome browser
AA seq
516 aa
AA seq
DB search
MFDTLSDRLASTFKNLRGKGRLSEADIDATAREIRIALLEADVALPVVRAFIKQVKERAT
GSEVSQALNPAQQVIKIVNEELIGILGGETRRLRLAKTAPTVIMLAGLQGAGKTTLAGKL
GRWLKGQGHAPMLVACDLQRPNAVNQLSVVAERAGVAIFAPEPGNGVGDPVQVAKDSIEY
ARGKQHDIVIVDTAGRLGIDQELMQQAADIRDAVSPDEVLFVVDAMIGQDAVNTAEAFRD
GVGFDGVVLSKLDGDARGGAALSIAHVTGKQIMFASNGEKLDDFDAFHPDRMASRILGMG
DMLSLIEKAEQTFSQAEAEKMAAKLAKGPKEFTLDDFLAQMEQVRKMGSISKLLGMLPGM
GQMKDQINNLDEREVDRTAAIIKSMTPAERQEPTIINGSRRARIAKGSGVDVSAVKGLVE
RFFEARKMMSKMAQGGGMPGMPGMPGMGGGGARKKKQVKQAKGKRKSGNPMKRKAEEEAA
AARREAAQAGNPLGLPQAGQDPQNFELPEEFKKFMG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgatacgctttccgaccgcttggcgagtactttcaaaaacctccggggcaagggc
cgcctgagcgaggcggacatcgacgccacggcgcgcgagatccggatcgcgctgctcgaa
gcggatgtggccctgcccgtcgtccgcgccttcatcaagcaggtcaaggagcgggccacc
ggctccgaggtctcccaggcgctgaaccccgcccagcaggtcatcaagatcgtcaacgag
gagctcatcggcatcctcggcggcgagacccgccggctgcggctcgccaagaccgcaccg
acggtgatcatgctggccggtctgcagggtgccggtaagaccaccctcgccggaaagctc
ggccgctggctcaagggccaggggcatgccccgatgctggtcgcctgtgaccttcagcgc
cccaacgccgtcaaccagctctccgtcgtcgccgagcgcgccggcgtggcgatcttcgcg
ccggagccgggcaacggcgtcggcgacccggtccaggtcgcgaaggactcgatcgagtac
gcccgcggcaagcagcacgacatcgtcatcgtcgacaccgccggccgtctgggcatcgac
caggagctgatgcagcaggccgcggacatccgcgacgcggtcagccccgacgaggtcctc
ttcgtcgtcgacgcgatgatcggtcaggacgcggtcaacaccgccgaggcgttccgcgac
ggcgtcggcttcgacggtgtggtgctctccaagctcgacggtgacgcccgtggtggtgcc
gcgctgtccatcgcgcatgtcaccggcaagcagatcatgttcgcctccaacggcgagaag
ctggacgacttcgacgcgttccacccggaccgcatggcgtcccgcatcctcggcatgggc
gacatgctcagcctgatcgagaaggccgagcagaccttcagccaggccgaggccgagaag
atggccgccaagctggcgaaggggcccaaggagttcacccttgacgacttcctggcccag
atggagcaggtccgcaagatgggctccatctccaagctgctcggcatgctgcccggtatg
gggcagatgaaggaccagatcaacaacctggacgagcgcgaggtcgaccgcaccgccgcc
atcatcaagtccatgaccccggccgagcgccaggagccgacgatcatcaacggctcgcgc
cgggcccgtatcgccaagggttccggtgtcgacgtcagcgcggtcaagggcctcgtcgag
cggttcttcgaagcccgcaagatgatgtcgaagatggcccagggcggcggcatgcctggc
atgccggggatgcccggaatgggcggcggtggcgcccgcaagaagaagcaggtcaagcag
gccaagggcaagcgcaagagcggcaacccgatgaagcgcaaggccgaggaagaggccgcg
gccgcccgccgcgaggccgcccaggccggcaacccgctgggcctcccgcaggccggccag
gacccgcagaacttcgaactccccgaggaattcaagaagttcatgggctga
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