Streptomyces tubercidicus: STRTU_002278
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Entry
STRTU_002278 CDS
T09099
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stud
Streptomyces tubercidicus
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stud03021
]
STRTU_002278
Transcription machinery [BR:
stud03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STRTU_002278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
DUF7343
HTH_23
MarR_2
HTH_24
Sigma70_ECF
MarR
HTH_Crp_2
NirdL-like_HTH
HTH_3
IF2_N
DinB_2
HTH_AraC
GerE
Motif
Other DBs
NCBI-ProteinID:
WAU16505
LinkDB
All DBs
Position
2696893..2697852
Genome browser
AA seq
319 aa
AA seq
DB search
MASSATIPEQQARPHPVGVDDHGGRLDAAEQAERADHMEQSEQPGQQAQQHEAPAPDDTV
QEEQHSPEPQDRSGARAMFYELRGLPDGSPERAELRNTLVRMHLPLVEHLARRFRNRGEP
LDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELR
LSLTTATAELSQRHGRAPTVHELAEHLAISEEEVLEGLESANAYSTLSLDVPDTDDESPA
VADTLGAEDEALEGVEYRESLKPLLEDLPPREKKILLLRFFGNMTQSQIAQEVGISQMHV
SRLLARTLAQLRDKLLVEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagtgcgaccatccccgagcagcaggcccggccgcatccggtgggcgtagac
gaccacggcggccggttggacgcggcggagcaggcagagcgggcggaccacatggagcag
agcgagcagccggggcagcaggcgcagcagcacgaggcgccggcccccgacgacacggtg
caggaagagcagcattccccggagccgcaggaccgcagcggcgctcgggcgatgttctat
gagctgcgcgggctgcccgacggctccccggagcgtgcggagctgcgcaacaccctcgtc
cgtatgcaccttccgctcgtcgagcatctggcccggcggttccgcaaccgcggcgagccg
ctcgacgatctgacccaggtcgccaccatcggcctgatcaagtccgtcgaccgcttcgac
ccggaccgcggcgtcgagttctccacgtacgccacccccaccgtcgtcggcgagatcaag
cggcacttccgcgacaagggatgggcggtccgcgtcccgcgtcgcctccaggagctgcgg
ctgtcgctgaccaccgcgaccgccgagctgtcccagcggcacggccgggcgcccacggtc
catgagctggccgagcatctggcgatctccgaggaggaggtcctggagggcctggagtcc
gccaacgcctacagcacgctctccctggacgtcccggacacggacgacgagtccccggcg
gtcgccgacaccctcggtgccgaggacgaggcgctggagggcgtggagtaccgggagtcc
ctcaagccgctgctggaggatctcccgccgcgggagaagaagatcctgctgctgcgcttc
ttcggcaatatgacccagtcgcagatcgcccaggaggtcggcatctcccagatgcacgtc
tcccgtctcctggcccgcaccctggcccagctgcgcgacaagctgctcgtggaggagtga
DBGET
integrated database retrieval system
