Streptomyces tubercidicus: STRTU_003297
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Entry
STRTU_003297 CDS
T09099
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stud
Streptomyces tubercidicus
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stud03021
]
STRTU_003297
Transcription machinery [BR:
stud03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STRTU_003297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
DUF7343
HTH_3
MarR
Sigma70_ECF
HTH_24
DUF134
Motif
Other DBs
NCBI-ProteinID:
WAU12884
LinkDB
All DBs
Position
3808378..3809214
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AA seq
278 aa
AA seq
DB search
MSVELGSSKVLPAIPAPAPHVHDDDAINTRTLSRSLFLRLASLDKDCAERTYVRDTLIEL
NLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRF
FRDTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVPELALCLGVSEEDVVDGLAVGN
AYTASSLDSPSPEDDGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLPARERQIIMLRF
FANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaactgggcagctcgaaggtgcttcccgcgattcccgcgcccgcaccgcac
gtgcacgacgacgacgccatcaacacccgcacgctctcccgctccctgttcctgcggctg
gcctcgctcgacaaggactgcgcggagcgtacgtacgtccgcgacacgctgatcgagctg
aacctcccgctcgtccgttatgcggccgcccgattccgcagccgcaacgagccgatggag
gacatcgtccaggtcggcacgatcggtctgatcaaggcgatcgaccgtttcgattgcgaa
cgcggcgtggaattcccgacgttcgcgatgcccaccgtggtgggcgagatcaagcgattc
ttccgcgacacctcgtggtcggtacgggtcccgcgccggctccaggagctgcggctcgcc
ctcaccaaggccagtgacgagctgtcccagaagctggaccgctccccgaccgttcccgaa
ctggccctgtgcctgggggtgtcggaggaggacgtggtcgacggtctggccgtcggcaac
gcctacaccgcctcctcgctcgactcgccctcccccgaggacgacggcggcgaaggctcc
ctcgcggaccgcctcggctacgaggacaccgccctggagggcgtggagtaccgcgagtcc
ctcaagcccctgctggccaaactcccggcccgtgagcgccagatcatcatgctgcgcttc
ttcgccaacatgacgcagtcccagatcggcgaggaggtcggcatctcccagatgcatgtc
tcccggctgctcacccgcaccctggcgcagctgcgcgagggcctcatctccgactga
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