Streptomyces tubercidicus: STRTU_003351
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Entry
STRTU_003351 CDS
T09099
Name
(GenBank) PAS domain-containing protein
Organism
stud
Streptomyces tubercidicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
PAS_7
Response_reg
HisKA
Motif
Other DBs
NCBI-ProteinID:
WAU12929
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All DBs
Position
3858085..3862617
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AA seq
1510 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDALLLVNCNGTVVNANTIALETFEAPGTALVGRGLLDLLP
SFDSKRIPGSMRRRDEEEERTRTKPTRMVARRTDGTELLVEVTSANLEDGRTPYESAFEA
AYADHRNGYTGNELLMLVVRDLTGTLDTETELARQQRQTEMILRAAAEGVVGVDADGKVV
LVNPSAAQILGYRASELGGKELHPLIHHSRADGSSLPWEDTPLADTLKSGRKHRVRGQAL
WAKDGRSVSVDLTTAPVRDGDQLVGAVMTFTDRRKFDALAARHSQLLAVLDQALRGPLEE
LKGELGTLASDPAGQLWPEANQILHHLAAGHARMTTLVDNVLSYQRLDSGKEKLNRTKVS
LDAVIAAGVEGAIELIGPGRAQFAVHAPPIEATVDAERIAQALSHLIADVAGVDSTGRMP
AGEAAVGAGSGPVPGDSTIVVAVAKRGDVVRIEVRGPFGGGDPVHEPIVRGIVRKHGGLM
QTHEVPGGGPGAGGSAYVLELPVAADGTSPDGATAGAEVPTGNETTVMPVPAARARGTQG
NAAAAGNGGQGPDDAGHDGHEGGADGEGGEGPSGGDGGGPGGSGGTGGSGEPLGGGGAEA
GAAVPGQAGGAQPTGRRRARHSGAEQGGHPVGPGGSGGADVSHGAVGDGAQGVAGPGMAG
PGVVDGGTGARPGHGDAVQGDAVHGAQGGPVTDGRGLPPGMAGAEAVPPTGRRRARQGAT
EGGGLPALPSGASPHPEQQGIAAGTQGRGPAGGPQGPAAGPQGQGQTAGPQGPGMSSAGG
PVPVPASASAPAQAIPQIPGQSPAPGQTPAPGRPHVPGQAAVPGQTPPPGPQGLAPVQTG
GRRARRALAEAPERTANGERTAPGERERAAAASGAQQSAGARTAFALPPAAADRTPESSA
SASALPATADQVPAQSAGPQEATGTGRRRARRPVAGGPEAAAVPGGQPGQPGQPGQPGQP
GQPGQPVHAPEGAVSSGAPQGEWDGEPTGRRRARRAAAEERAAAAMADAESSGTFVAGPE
GLVAQPTGPDGATGTDGGTAPGSAPAADAGAPQSPEAAQPAPVAPQDPQSPQAPQAPTGR
RRGRPSPAEEAAGPPPVPPQAGPAATPHRQPLPPAAEDDGFAAGHSQGRAFSVRTLGQGV
PFAQQIADQQRPPVPPGSTPPGGTSAGSGRRRKLAAPPQEDRRATAAESAPAGAPSHPGA
PQPQPQPHPQAPAQPPHPQHPQPHLMDASEGRAFAISAPDEGSEGPEPLDGPNGAIEVMD
RQPMPMDDELPPEPLDNPRRLLVWPAPDVATQQALSDRGYRPVIVNSREEVDAQIAAYPA
ALFVDPLTGPITRTALQSLRQAAGAAEVPVLVTAGLGQATREAAYGADPAVLLKALAPRD
SEQHPPRVLLIEQNDDIAGALTMSLERRGMQVGRAGADADAVTLATQMRPNLVVMDLMQV
RRRRAGIVDWLRANGLLDHTPLVVYTSADMDPAQLPRLAAGETVLFLAERSTSAEVQARI
VDLLAKIGTN
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgcagccatactcgacgccctcccc
gacgcgctgttgctcgtcaactgcaacggcacggtcgtcaacgccaacaccatcgcgctg
gagaccttcgaggcgccgggcacggccctggtggggcgcgggctgctcgatctgctgccg
tccttcgactccaagcgcatcccggggtccatgcggcgccgggacgaggaggaagagcgc
acgcggacgaagccgacgcggatggtcgcgcggcgtacggacgggaccgagctgctggtc
gaggtgaccagcgccaatcttgaggacggccgcacgccgtacgagtccgccttcgaggcc
gcgtacgccgatcaccggaacggctatacgggcaatgagctgctgatgctcgtggtccgc
gatctgaccgggacgctggacaccgagaccgagctggcccgtcagcagcggcagaccgag
atgattctgcgggccgcggccgagggtgtggtcggggtcgacgccgacggcaaggtcgtg
ctcgtcaatccgtccgcggcgcagatcctcggctaccgggcgagcgagctgggcggcaag
gagctgcatccgctcattcatcactcgcgggcggacggctcgtcgctgccatgggaggac
acaccgctggccgacacgctcaagtcggggcgcaagcaccgggtgcgcgggcaggcgctg
tgggcgaaggacggccggtcggtgtccgtcgatctgacgacggcgccggtgcgggacggc
gatcagctcgtcggcgcggtgatgaccttcaccgaccggcgcaagttcgatgcgctggcg
gcccggcacagccagctgctggcggtgctcgaccaggcgctgcgcgggccgctggaggag
ctcaagggcgagctgggcacgctcgcctccgacccggcgggccagctctggcccgaggcg
aatcagatcctgcaccacctcgcggccggccatgcccggatgacgacgctggtggacaac
gtcctgagctatcagcggctggactccggcaaggagaagctcaaccgcaccaaggtctcc
ctggacgccgtgatcgcggcgggtgtcgagggcgcgatcgagctgatcgggccgggccgg
gcgcagttcgcggtgcatgcgccgccgatagaggcgacggtcgacgcggagcggatcgct
caggcgctgtcgcatctgatcgcggatgtcgcgggggtggactcgacgggccggatgccg
gccggtgaggctgccgtgggcgcgggttcgggaccggttcccggcgattcgacgatcgtg
gtggcggtggccaagcgcggtgatgtcgtacggatcgaggtgcgcggcccgttcggtggc
ggcgacccggtccatgagccgatcgtccgcggcatcgtgcggaagcacggcgggctgatg
cagacgcatgaggtgcccggcggcgggcccggcgcgggcggcagcgcgtatgtgctggag
ctgccggtggcggcggacggcacgtccccggacggcgcgacggccggggcggaggtgccg
accggcaatgagacgacggtgatgccggttccggcggcccgtgcgcgcggcacgcagggc
aacgcggcggccgcgggcaacggcggccaggggccggacgacgcggggcacgacgggcac
gagggcggcgcggacggcgagggcggcgagggcccttccggtggtgacggcggcgggccg
ggtgggtccggcgggaccggtgggtccggtgagccgctcggtggcggtggtgccgaggcc
ggtgcggcggttccggggcaggcgggtggagcgcagccgaccgggcgtcggcgggcgcgg
cactcgggtgcggagcagggcgggcatccggtcgggccgggcggttccggcggggccgat
gtgtcgcatggtgccgttggtgacggtgcgcaaggtgtggcgggcccaggtatggcgggc
ccgggtgtagtggacggcggcacgggggcgcgccccgggcacggtgatgccgtgcagggt
gatgccgtgcacggtgcccagggtggcccggtcacggacggccgggggctgccgcccggt
atggcgggggccgaggccgtaccgccgacggggcggcgccgggcccggcagggggcgacg
gagggcggcgggctgcccgcgctcccctccggggcgagcccgcatccggagcagcagggg
atcgcggcggggacgcagggccgaggtccggcgggcggtccgcaggggcccgcggccggg
cctcagggccagggacagactgccggtccgcaggggcccgggatgtcgtcggccggtggg
ccggtgccggtgccggcctccgcgtcggcgcctgcccaggcgatcccacagattccaggt
cagagcccggctccggggcagactccggcgccgggccggccgcatgttccggggcaggcc
gctgtccccggccagacgccgcccccggggccgcaggggctcgcacccgtccagacgggc
gggcggcgggcgcgccgggcgctggccgaggctcccgagcggaccgcaaacggtgaacgg
accgccccgggtgagcgggaaagggcagccgcggcctccggggcgcagcagtcggccggt
gcgcgtaccgccttcgcgctgccgcccgccgccgcggaccggaccccggaatcgtcggcg
tcggcgtccgcgctgcccgcgaccgcggaccaggtgcccgcgcagtcggccggtccgcag
gaggccaccggtacgggacgccgtagggcacgtcggccggtggccggtggcccggaggca
gcggcggtgcccggcgggcagccgggacagccgggacagccgggacagccgggacagccg
ggacagccagggcagccggtgcacgcgcccgaaggggccgtcagctccggtgcgccgcaa
ggagagtgggacggcgagccgaccggcagacggcgggccagacgggccgcggccgaggag
cgcgcggcggccgcgatggccgacgccgagtcgtccggcaccttcgtcgcgggcccggag
gggctcgtggcacagcccaccggaccggacggggcgacgggcacggacggcggcacggcg
cccggcagcgcccccgcagcggacgccggtgccccccagtcgcccgaggcggcgcagccc
gcacccgtcgcgcctcaggacccgcagagcccgcaggccccgcaggcccccaccggccgt
cgccgtggccgccccagccccgccgaggaggccgcgggcccgccgcccgtgcctccgcag
gccgggcccgccgccacgccgcaccgtcagccgctgccgccggccgccgaggacgacggg
ttcgccgcggggcactcccaggggcgggcgttcagcgtgcgcaccctcgggcagggcgtg
ccgttcgcccagcagatcgccgatcagcagcgcccgccggtgccgcccggcagcaccccg
cccggtggtacgtccgccggttcgggccgccgccgtaagctcgccgcgcccccgcaggag
gaccggcgcgcgacggccgccgagtccgccccggccggggcgccttcgcacccgggtgct
ccccagccgcagccgcagccccatccgcaggccccggcccagccgccgcacccgcagcac
ccgcagccgcatctgatggacgcgagcgaggggcgggcctttgcgatctccgcgcccgac
gagggcagcgagggccccgagccgctggacggcccgaacggcgccatagaggtgatggac
cgtcagccgatgccgatggacgacgagctgccgccggagccgctggacaatccgcgccgg
ctgctggtctggccggcgccggatgtcgccacccagcaggcgctgagcgaccgcggctac
cgcccggtgatcgtcaactcccgcgaggaggtggacgcccagatcgccgcgtacccggcg
gcgctcttcgtcgatccgctgaccgggccgatcacccgtacagcgctgcagtcgctgcgc
caggcggcgggcgcggccgaggtccccgtactggtgaccgccggtctggggcaggccacc
cgggaggccgcgtacggcgccgatccggccgtgctcctcaaggcgctggccccgcgcgac
agtgagcagcacccgccgcgggtgctgctgatcgagcagaacgacgacatcgcgggcgcc
ctgaccatgtcgctggagcggcgcgggatgcaggtcggacgggccggcgcggatgccgac
gcggtcaccctcgcgacgcagatgcggccgaatctggtcgtgatggatctgatgcaggtg
cggcggcgccgggccggcatcgtcgactggctgcgcgccaacggactgctcgaccacacc
ccgctggtcgtctacacctccgccgacatggacccggcgcagctgccccggctggcggcc
ggtgagacggtgctcttcctggcggagcgctccacgagcgccgaggtacaggcccggatc
gtcgacctgctcgccaagatcggtacgaactga
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