Streptomyces tubercidicus: STRTU_003421
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Entry
STRTU_003421 CDS
T09099
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud00300
Lysine biosynthesis
stud00470
D-Amino acid metabolism
stud01100
Metabolic pathways
stud01110
Biosynthesis of secondary metabolites
stud01120
Microbial metabolism in diverse environments
stud01230
Biosynthesis of amino acids
Module
stud_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STRTU_003421 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STRTU_003421 (lysA)
Enzymes [BR:
stud01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
STRTU_003421 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WAU12988
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All DBs
Position
3932946..3934388
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AA seq
480 aa
AA seq
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MSHSTLPPAGRVTGAPPRATAVAPPPLTAARPRTAAPPRTAAAPPPSGSEPRSIWPASAA
PVGPDDLAIGGVPLTKLADRFGTPAYVLDEDEVRHRCRAYLRAFPDAEVYYAAKAFLCRA
MVRWVQEEGLGLDVCSAGELELAVTTGFPPERIVLHGNAKSPADLRAALRLGVGRIVIDS
TSEIARLAAAVPAGSRQKVLIRVVPGIAAGGHAKIRTGTDDQKFGLSIADGSAQHAIARV
LGQPRLELTGLHCHLGSQITTVKPYLSAVRRLIGLLARVREHHGVTLPELDLGGGHGVAY
CPGEPALDLASLGTKIRAELAGGCAAAGLPVPRLAVEPGRAIAGPAGVVLYRVLSVKRTG
SHTFVAVDGGMSDNPRPALYGVRYAPRLVGRASAAAPEPVTVVGRHCEAGDVLAPDAQLP
GDIRPGDLLAVPVAGAYHLSMASGYNLVGRPPVIAVTEGRARLLVRRESLADIQERDIGM
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacagcactctgcccccggccggccgcgtgaccggtgccccgccgcgggccacc
gccgtcgcgcccccgccgctcaccgcggcccggccccgtaccgccgccccgccccgtacg
gccgctgccccgccgccgtccggcagcgagccgcggtccatctggcccgcgtccgcggca
ccggtcggccctgacgacctcgccatcggcggcgtcccgctcaccaagctggccgaccgc
ttcggcacccccgcctacgtcctggacgaggacgaagtacgccaccgctgccgcgcctac
ctacgggctttccctgatgccgaggtctactacgcggccaaggccttcctgtgccgcgcg
atggtgcgctgggtgcaggaggaggggctggggctggacgtctgctccgccggagagctg
gaactggccgtcaccaccggtttcccgcccgagcggatcgtgctgcacggcaacgccaag
agccccgccgacctgcgcgccgcgctgcggctgggcgtcggccggatcgtcatcgacagc
acctcggagatcgcccggctggccgccgcggtcccggcgggcagccgacagaaggtactg
atccgggtcgtgccggggatcgccgccgggggccacgccaagatccgtacgggcaccgac
gaccagaagttcggcctgtcgatcgccgacggctccgcccagcacgccatcgcccgggtg
ctcggccagccgcggctcgaactgacgggcctgcactgccacttgggctcgcagatcacc
accgtcaagccgtatctgtcggcggtacgacgactgatcggcctgctcgcccgggtccgg
gagcaccacggcgtcacgctgccggaactggacctcggcggcggccatggcgtcgcctat
tgcccgggcgagcccgcgctcgacctcgcttccctcggcaccaagatccgcgccgaactg
gccggcggctgtgcggcggccgggctgccggtgccccggctcgccgtcgaaccgggccgc
gccatcgcgggcccggccggggtcgtcctctaccgggtgctgtccgtcaaacggaccggc
tcccacaccttcgtggcggtggacggcgggatgagcgacaacccgcggcccgcgctctac
ggggtgcgctatgcgccccggctggtcggccgcgcctcggcggccgcgccggaacccgtc
accgtcgtcgggcggcactgcgaggccggcgatgtcctcgccccggacgcccaactgccc
ggcgacatccgccccggcgatctgctggccgttcccgtcgccggtgcgtaccacctctcg
atggcctccggctacaacctcgtcggccggccgccggtcatcgccgtcacggaagggcgc
gcccgtcttctcgtacggcgcgaatccctcgcggacatccaggagcgggatatcgggatg
tga
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