Streptomyces tubercidicus: STRTU_004744
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Entry
STRTU_004744 CDS
T09099
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud00550
Peptidoglycan biosynthesis
stud01100
Metabolic pathways
stud01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
STRTU_004744 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
STRTU_004744 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stud01011
]
STRTU_004744 (mrdA)
Enzymes [BR:
stud01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
STRTU_004744 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
stud01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
STRTU_004744 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WAU14158
LinkDB
All DBs
Position
5464343..5466493
Genome browser
AA seq
716 aa
AA seq
DB search
MSNLPESRTSRVSVRLIAIQILVFSLLLTLGGRLWYLQIRNGQEYATEAKNNHVQQVIEP
ATRGSILDARGVPLADNQTRLVVSASRTELLKMKDDGKAVLGRLAKVLGMSGKEIRNKVR
LCDAKTPQPCWNGSPYQPIPITDEATTQQALQIRERSEDFPGISAEPTAVRRYAAPGNAN
TAQVLGYLSPVTDQEIKKAEHSRSPLLRSDQIGRSGLERTYDDALRGKAAVTRYEVDNLG
RVIGQAKSEKGRAGASVVTSIDARVQGLAEKQLDQAMKDARKEHDRNTGTNYKADSGAVV
VMEAKTGRVVAMASNPSYDPNAWVGGISGKDYGRLTGKDSNYPLLNRAIQGQAAPGSIFK
VISTAAAVNAGYDFNGHYPCTSSYSIGGQTFKNFESQSHGAISLGRALEVSCDTVFYRLS
HDEWKKDGGDKPKKEAKNWFYKTAHQFGLGSETGIDLPNEVTGRVPDRKWKNAFWKANKA
GWCEQAKAWPKKKDFGTKLAREGCLEGMKLHAYDSINYAIGQGDTLVTPIQMATIYGAIS
NGGTLYNPTVGKAVVSPDGKHIQRIKPTSHGKLPVSHKTLGQMDGALAGVATRGTAAWRF
GGWPQDKIPMHAKTGTAEVYGKQTTSWFATYTKDYTIVMTISQGGTGSGASGPAVRNIYN
ALYGVDEKGGINPKAALLPRPEAKLPKIESDGAIRSQPIKPYAPPSPSPSASESPQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatctcccggaatcccggacctcccgggtcagcgtccggctcatcgcgattcag
atcctggtcttctcgctgctgctcacgctcggcggccggctctggtatctgcagatccgc
aacggccaggagtacgccaccgaggcgaagaacaaccacgtccagcaggtcatcgagccc
gccacccgcggctccatcctcgacgcgcgcggggtgccgctggccgacaaccagacccgt
ctggtggtgtcggcgagccgtaccgagctgctgaagatgaaggacgacggcaaggccgtg
ctcggccggctggccaaggtgctcggcatgtccggcaaggagatccggaacaaggtccgg
ctgtgcgacgccaagacgccgcagccgtgctggaacggctcgccctaccagccgatcccg
atcaccgacgaggccacgacccagcaggccctccagatccgcgagcgctccgaggacttc
cccggcatcagcgccgagccgaccgccgtccgccggtacgcggccccgggcaacgccaac
accgcccaggtcctcggctatctctcgccggtcaccgaccaggagatcaagaaggccgag
cacagccgttcgccgctgctgcgctccgaccagatcggccggtccggtctggagcggacg
tacgacgacgcgctgcgcggcaaggccgccgtcacccgctacgaggtcgacaacctcggc
cgggtcatcggccaggcgaagagcgagaagggccgggccggcgccagcgtcgtcaccagc
atcgacgcccgggtgcagggcctggcggagaagcagctggaccaggccatgaaggacgcc
cgtaaggagcacgacaggaacacgggcaccaactacaaggccgactcgggcgccgtcgtc
gtcatggaggcgaagaccggccgggtggtggcgatggcctccaacccctcctacgacccc
aacgcctgggtcggcgggatctcgggcaaagactacggccgcctcaccggcaaggactcc
aactacccgctgctgaaccgcgccatccagggacaggccgcccccggctcgatcttcaag
gtcatctcgaccgccgccgcggtcaacgcgggctatgacttcaacggccactacccctgc
accagctcgtacagcatcggcggccagaccttcaagaacttcgagtcgcagagccatggc
gcgatcagcctcggccgggcgctggaggtctcctgcgacaccgtcttctaccggctctcg
cacgacgagtggaagaaggacggcggggacaagccgaagaaggaagccaagaactggttc
tacaagacggcccaccagttcggcctcggcagcgagaccggaatcgacctcccgaacgag
gtcaccggccgggtccccgaccgcaagtggaagaacgccttctggaaggccaacaaggcc
ggctggtgcgaacaggccaaggcctggcccaagaagaaggacttcggcaccaagctcgcc
cgggagggctgcctggagggcatgaagctgcacgcctacgactcgatcaactacgccatc
gggcagggcgacaccctcgtcaccccgatccagatggcgacgatctacggggcgatcagc
aacggcggcacgctctacaacccgaccgtcggcaaggccgtcgtcagccccgacggcaag
cacatccagcggatcaagcccacctcgcacggcaagctgccggtctcccacaagaccctc
gggcagatggacggcgccctcgccggtgtcgccacccgcggtaccgccgcctggcggttc
ggcggctggccgcaggacaagatcccgatgcacgccaagaccggtacggccgaggtctac
ggcaagcagaccacctcgtggttcgcgacgtacaccaaggactacacgatcgtcatgacg
atctcccagggtggtacgggctccggcgcctccggccccgccgtacgcaacatctacaac
gccctgtacggagtcgacgaaaagggcggcatcaaccccaaggccgcgctgctcccgagg
ccggaggccaagctgcccaagatcgaaagtgatggcgccatccggtcccagcccatcaag
ccgtatgccccgccgtcgccgtcgccgtccgcatcggagagcccacagtga
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